Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq51865 93.3 5e-14 seq95708 87.8 2e-12 >seq51865 Length=821 Score = 93.3 bits (102), Expect = 5e-14 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 32703 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 32762 ||||||||||| ||||| |||||||| ||||||||||| || ||||| || ||||| || Sbjct 533 TCGTTGGAAAAGGTGAGGCCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCG 474 Query 32763 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 32803 || || ||| ||||| |||||||| || || || || || Sbjct 473 AAAGAGCCACTGAAGAAGATTCCTTCCACCGCAGCGAACGC 433 >seq95708 Length=954 Score = 87.8 bits (96), Expect = 2e-12 Identities = 221/333 (66%), Gaps = 6/333 (2%) Strand=Plus/Plus Query 32883 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 32942 ||||| || ||||| || || ||||| || | ||||| | ||| ||||||||| Sbjct 17 GTCTCAATTGCATTGAAAAGGTAGTTGCGTTGAGCGTGCTCTTTGATATAGGTATCAATC 76 Query 32943 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCAT 33002 || || || | ||||| || |||||||| || || || |||||||| ||||| Sbjct 77 AAGAGGGAGTAAGTCTCCGAGTGGATGTTTTCCATCATGATCTGGAATCCGTAAAAGCAA 136 Query 33003 CTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATT 33062 | ||| || | | || || ||| | || || || | || || || || || || Sbjct 137 CGAGCTTCTGGCACTTGGACCTCTCCGCTGAAACGCTCAACCAAGTTCTCGTTGACAATG 196 Query 33063 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT 33122 |||||| ||| || || || || | | || || || ||||| ||||| | ||| Sbjct 197 CCGTCAGAGGCAGCGAAGAATGCGAGGATGTGGGAGATGAAGTATTTCTCGTC-GTCGTT 255 Query 33123 ----AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAA 33178 | || |||||||| | | |||||| || | ||| | ||||| | ||||| || Sbjct 256 CAGACGGTTGTTCCAATCGTGCAGATCTTTGGAGAGATCAATCTCTTCGGC-GTCCAGAA 314 Query 33179 TGATGCCTCTGCCTTTTTATACATATTCCAGAT 33211 || ||||| ||||| || ||||| | ||| || Sbjct 315 GGAAGCCTCGGCCTTCTTGTACATTTGCCAAAT 347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632599971880000