Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq28556 104 2e-17 seq30797 82.4 7e-11 >seq28556 Length=388 Score = 104 bits (114), Expect = 2e-17 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| || || ||||| | ||||| || ||||||| | ||||| ||||| || Sbjct 283 AATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACGCTAGAAGTAGAGTCTTC 224 Query 25058 TGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || || || ||| || ||| ||||||||||| ||||| || ||| Sbjct 223 GGATACCATTGA--CAATGTCAAGTCGAAGATCCAGGACAAAGAAGGCATTCCTCCGGAC 166 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | || || ||||| || || | ||||||| || || | |||||| Sbjct 165 CAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGTACCCTCTCTGATTAC 106 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || |||||||| || || || || || || || || Sbjct 105 AACATTCAAAAGGAGTCTACCCTTCACTTGGTCCT 71 >seq30797 Length=220 Score = 82.4 bits (90), Expect = 7e-11 Identities = 100/132 (76%), Gaps = 6/132 (5%) Strand=Plus/Plus Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070 || ||||||||||| || || ||||||| | || |||||||| || ||||| ||||| Sbjct 92 GTCAAGACTTTGACTGGAAAGACCATCACTCTTGAGGTGGAGTCCTCCGACACCATCGA- 150 Query 25071 TCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATT 25127 || || ||| | || | ||| ||||| ||||| ||||| |||||||| ||||| | Sbjct 151 -CAATGTAAAGTCGAAGATTCA-GGACAAGGAAGGCATTCCCCCTGACCAGCAGCGTCTG 208 Query 25128 ATTTTTGCCGGC 25139 || ||||| ||| Sbjct 209 ATCTTTGCTGGC 220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432639861594500