Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq34483 91.5 2e-13 seq31229 91.5 2e-13 seq45636 87.8 2e-12 >seq34483 Length=1392 Score = 91.5 bits (100), Expect = 2e-13 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 162253 ACCTCTCCTGGGTCAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCAC 162312 |||||||| | | | |||||||||||||||||||| | ||||||||||| || |||||| Sbjct 1227 ACCTCTCC-GCGCCCTTAGCTCAGCTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCAC 1285 Query 162313 AGGTTCGAATCCTGT 162327 ||||||||||||||| Sbjct 1286 AGGTTCGAATCCTGT 1300 >seq31229 Length=3871 Score = 91.5 bits (100), Expect = 2e-13 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 162253 ACCTCTCCTGGGTCAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCAC 162312 |||||||| | | | |||||||||||||||||||| | ||||||||||| || |||||| Sbjct 136 ACCTCTCC-GCGCCCTTAGCTCAGCTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCAC 78 Query 162313 AGGTTCGAATCCTGT 162327 ||||||||||||||| Sbjct 77 AGGTTCGAATCCTGT 63 >seq45636 Length=1761 Score = 87.8 bits (96), Expect = 2e-12 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 162269 TAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAATCCTG 162326 ||||||| ||||||||||||||||||||||||||||| |||| ||||||||| ||||| Sbjct 106 TAGCTCAACTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCGCAGGTTCGAGTCCTG 49 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566308120880000