Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq95708 84.2 2e-11 seq34821 82.4 8e-11 >seq95708 Length=954 Score = 84.2 bits (92), Expect = 2e-11 Identities = 192/287 (67%), Gaps = 4/287 (1%) Strand=Plus/Plus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 || || ||||| || || || || || | || || |||| || ||||| || ||| Sbjct 62 ATATAGGTATCAATCAAGAGGGAGTAAGTCTCCGAGTGGATGTTTTCCATCATGATCTGG 121 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 |||||||| || || | |||||| | | || || ||| || | ||| || | Sbjct 122 AATCCGTAAAAGCAACGAGCTTCTGGCACTTGGACCTCTCCGCTGAAACGCTCAACCAAG 181 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 || || ||||| || || || || || || || || || | || || || || | | Sbjct 182 TTCTCGTTGACAATGCCGTCAGAGGCAGCGAAGAATGCGAGGATGTGGGAGATGAAGTAT 241 Query 93542 TTCTCATCATCTTT---AAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCT 93598 ||||| || || || | | || | ||||||| |||||||| || ||||| | ||| Sbjct 242 TTCTCGTCGTCGTTCAGACGGTTGTTCCAATCGTGCAGATCTTTGGAGAGATCAATCTCT 301 Query 93599 TCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645 ||| | ||||| || || || || || || |||||||| | ||| || Sbjct 302 TCGGC-GTCCAGAAGGAAGCCTCGGCCTTCTTGTACATTTGCCAAAT 347 >seq34821 Length=2575 Score = 82.4 bits (90), Expect = 8e-11 Identities = 133/189 (70%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 69132 CCGCGACCCGACTGCGGTGAGACCAGTTA-CGTAGGTAACGGCAGATTGAGTGGAAAAAT 69190 |||| ||||||| |||||| ||||| || ||| ||| |||| | ||| ||| | Sbjct 1310 CCGCCACCCGACCACGGTGAAACCAGCTATCGT-GGTCACGGTCGTCTGACTGGCCGTAA 1368 Query 69191 TGCATTAGTAACCGGTGGAGATTCCGGTATAGGTCGCGCGGTCGCTATAGCGTTCGCACG 69250 || | | || || |||||||||||||| |||||||| || ||||| || | ||||| Sbjct 1369 AGCCCTGATCACAGGGGGAGATTCCGGTATCGGTCGCGCTGTGGCTATCGCCTATGCACG 1428 Query 69251 TGAGGGTGCCAAGGTAATGATAAACTTCCTACCAGAAGAATATCCAGACGCAAACGAAGT 69310 ||| |||||| | || || |||| | ||||||||| | | || || ||||| Sbjct 1429 TGAAGGTGCCGATGTGGCAATTAACTATTTGCCAGAAGAAGAGTCCGATGCGGCTGAAGT 1488 Query 69311 GATAAATCT 69319 ||| || || Sbjct 1489 GATTAAACT 1497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555953812972000