Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq90156 89.7 1e-12 >seq90156 Length=461 Score = 89.7 bits (98), Expect = 1e-12 Identities = 151/214 (71%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 19710 GCACTCTTCCTTGGTCGCGGGCTCCATGCACCGGTTGCCTACGAAGGCGCCCTCAAGCTC 19769 || || ||||| || ||||| || || ||| | ||| || ||||| ||||||||| Sbjct 49 GCGCTGTTCCTGGGCCGCGGCCTGCACTACCCGATCGCCCTGGAGGGCGCGCTCAAGCTC 108 Query 19770 AAGGAGATCAGTTACATCCACGCAGAGGGTATTTCGGCAGGCGAACTTAAGCACGGGCCT 19829 ||||| |||| ||||||||||| ||||| |||| |||||||| |||||||| || Sbjct 109 AAGGAAATCACCTACATCCACGCCGAGGGCTACCCGGCCGGCGAACTCAAGCACGGCCCG 168 Query 19830 CTTGCTCTTCTCAACAAGCC--TGTTCCGGTTGTAGTG-TCTCTGGCAGACCACAGTTGC 19886 || || || || || ||| | ||||| || ||| || | | | || ||| Sbjct 169 CTGGCGCTGGTCGAC--GCCAACATGCCGGTGGTGGTGATCGC-GCCCAACGACACCCTG 225 Query 19887 CTGGATAAGCTAAAGTCAAACATCGACGAAGTGC 19920 ||||| ||| | ||||| ||||| | ||||||| Sbjct 226 CTGGAGAAGGTGAAGTCGAACATGCAGGAAGTGC 259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1026120858582300