Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_008717.1 Length=36415 Score E Sequences producing significant alignments: (Bits) Value seq74251 159 8e-35 >seq74251 Length=708 Score = 159 bits (176), Expect = 8e-35 Identities = 275/392 (70%), Gaps = 22/392 (6%) Strand=Plus/Minus Query 2853 GACGGCCACACGTTCGACGCCGAGGTCCAGCACCCGATGCACGGCCGGCCTTTCCGGCCG 2912 |||||||||| ||||||||||||| || |||| || |||| ||| | | | ||| Sbjct 609 GACGGCCACAAGTTCGACGCCGAGATCATCAACCCTCTGACGGGCCAGCCGTACAGACCG 550 Query 2913 GAAATCACCACCATCATTGACATCCGTACCCGCCGCATTCCGGGATGGTCCACCGGCCTG 2972 ||||||||||| | || ||| || ||||| ||| | ||| || |||| | Sbjct 549 GAAATCACCACGGTTATCGACGTCGCCACCCGGCGCGTAGTGGGTATTTCGGTCGGCGAG 490 Query 2973 GCCGAGTCGGCCCTGGTGGTGGTCGATGCCCTGCGCGACGCCTGCACCAAGGGCG-GCAT 3031 |||||||||||| | | ||| | || | |||||| |||||| | || || |||| Sbjct 489 GCCGAGTCGGCCATCGGTGTGCTGGACG-CCTGCGTGACGCCATC----CGGTCGTGCAT 435 Query 3032 CCCGGCCATCTTCTACGTTGACAACGGCTCGGGCTACGTCAACCACATGATGCGCGACGA 3091 || | |||||||| ||||| || ||||||| || ||| ||| ||||||| Sbjct 434 GTTCGCTGTGTTCTACGTGGACAATGGTTCGGGCTTCGCCAATGACACAGTGCGCGA--- 378 Query 3092 GGCGGTCGGCCTTATGGGCCGCCTGGGCATCGA-TATGAAGAACAGCCTGCCCTACAACA 3150 ||||| ||| |||||||||| ||| |||| | || ||||||||||||| Sbjct 377 ---GGTCG------TGGACCGCCTGGGCGGCGACCATGACGCACTCGCTGCCCTACAACA 327 Query 3151 GCCAGGCGCG-GGGCGTGATTGAGCGCGTCCACCAGAGCCTGTGGATTCGGGCCGCCAAG 3209 ||||||| || || | || | ||||| | |||||||| | | ||| | || |||||| Sbjct 326 GCCAGGCACGCGGTCCTG-TCGAGCGAG-CCACCAGACCATTTGGGTCAATGCGGCCAAG 269 Query 3210 GAACTGCCCGGCTACATCGGCGCCGACATGGA 3241 | ||| || ||||||||||||| |||||||| Sbjct 268 AAGCTGACCAGCTACATCGGCGCAGACATGGA 237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116226282922200