Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq28556 131 1e-25 seq2641 100 2e-16 >seq28556 Length=388 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| |||| | || || || | ||||| || ||||||||||||||||| Sbjct 53 ATACCGCCACGAAGTCGAAGGACCAAGTGAAGGGTAGACTCCTTTTGAATGTTGTAATCA 112 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| |||||| || || || || ||| ||||||||||||| ||||||||| Sbjct 113 GAGAGGGTACGGCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 172 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||||||||| ||||| || | | |||| ||| || | || || Sbjct 173 GGAATGCCTTCTTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTATCCGAAGACTCT 232 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || |||||||| || || || || || || ||||| Sbjct 233 ACTTCTAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 282 >seq2641 Length=263 Score = 100 bits (110), Expect = 2e-16 Identities = 149/209 (71%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| |||| | ||| | ||| | ||||||||||| ||||||||||||||| Sbjct 249 ATTCCACCACGAAGTCGAAGAACCAGATGCAGAGTAGATTCTTTCTGAATGTTGTAATCG 190 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| |||||| | || |||||||| ||||||| || ||||| || || Sbjct 189 GCAAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAGATGAGTCGTTGTTGATCGGGG 130 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT-AGCTGTTCAACGGTGTCGGTGGATTC 114331 ||||| || || ||||| || ||| ||||| | | || | || || | ||||| Sbjct 129 GGAATACCCTCCTTGTCTTGAA--TTTGGTTTTGACATTGTCGATAGTATCCGAAGATTC 72 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCA 114360 || || | ||| | || |||||||||| Sbjct 71 AACTTCAAGGGTGATAGTCTTGCCGGTCA 43 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419467213443600