Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq19617 102 7e-17 >seq19617 Length=1959 Score = 102 bits (112), Expect = 7e-17 Identities = 166/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 20416 GTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAAT 20475 |||||| || | ||| ||||| | || |||| || || || || || || | || Sbjct 1865 GTTCCATGCGCTCATGATGATCCGTCGGTCGTATGGCTTGTTCTTGATCTTGTCTATAAC 1806 Query 20476 GTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGC 20535 || | | || || | |||| ||| || ||||| | | || ||||||||| | || Sbjct 1805 GTCTGCGAGCTGATCGACGCCCTTGCCCGTGTAGTCCGTCTTTGCATCCACGTACTCTGC 1746 Query 20536 CCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGC 20595 |||||||||| ||| ||||| ||||| || ||||||| || || || | ||||| Sbjct 1745 GCCAAAGTGCCGCCATTGGAACCCGTACACGGGTCCCAGGTCGCCTACCTCGCGGTGCGT 1686 Query 20596 CAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCCTG 20654 |||||| | | | |||||||| | ||||| ||| |||||||||||||| |||| Sbjct 1685 GAGGCCGAGGTTGTCTAGGAACTCGCGTGAGCCGTTTCCATCCCATATCTTGACGCCTG 1627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440653914052000