Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_009543.1 Length=44520 Score E Sequences producing significant alignments: (Bits) Value seq38026 93.3 1e-14 >seq38026 Length=5128 Score = 93.3 bits (102), Expect = 1e-14 Identities = 140/197 (71%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 3988 GATGTGACTGTTAATATTGATTCGCCGGGCGGAGACATGTTTGCAGGGTTGGCCATTTAT 4047 ||||||||||| ||||| | ||||| |||||||||||||||| ||| |||| ||||| Sbjct 3076 GATGTGACTGTGAATATCAACTCGCCCGGCGGAGACATGTTTGAAGGCCTGGCGATTTAC 3135 Query 4048 AATCAGCTTATTGCACACCAAGGCAAGGTCACTGTTAATGTTGTGGGCCGTGCTGCCTCA 4107 || | || | || |||| ||||| || || || ||| |||| | || || || Sbjct 3136 AACCTTCTGCGCGAGTACGAAGGGAAGGTGACGGTAAAAGTTCTGGGTCTGGCAGCATCT 3195 Query 4108 GCAGCAAGCGTGATTGCAATGTCTGGCGATCAGATCAACAT--GCATACATCCGCCTTCT 4165 ||||| | | || |||||| | |||||| || | | || || | || ||| Sbjct 3196 GCAGCTTCCATTATCGCAATGGCGGGCGATGAGGTGCAGATTGGCCGGGGT--GCTTTCC 3253 Query 4166 TGATGATCCACAACTGC 4182 ||||||||||||||||| Sbjct 3254 TGATGATCCACAACTGC 3270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142122151825200