Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_010116.1 Length=58663 Score E Sequences producing significant alignments: (Bits) Value seq89998 111 6e-20 seq83684 89.7 2e-13 >seq89998 Length=593 Score = 111 bits (122), Expect = 6e-20 Identities = 114/147 (78%), Gaps = 9/147 (6%) Strand=Plus/Minus Query 5615 GAGGAGTTCGACTATGGCTATGCGCTCACCGTCCACAAGTCGCAGGGCTCCCAGTGGAAC 5674 || || |||||||| |||||||||||||||||||| ||| ||||||| || |||||| || Sbjct 566 GACGACTTCGACTACGGCTATGCGCTCACCGTCCATAAGGCGCAGGGGTCGCAGTGGGAC 507 Query 5675 AACGTCCTGCTGTTTGACGAGTGGTACGGG----AAGGA---CCGGAAGGAATGGCTGTA 5727 ||||| |||||| |||||| | | ||| ||||| || || ||||| || Sbjct 506 CACGTCAGGCTGTTCGACGAGAGCT--GGGCCTCAAGGATTCGCGCGAGCGCTGGCTCTA 449 Query 5728 CACCGCCATTACCCGGGCCGCGGAACG 5754 ||||||||| ||||| ||||| ||||| Sbjct 448 CACCGCCATCACCCGCGCCGCAGAACG 422 >seq83684 Length=502 Score = 89.7 bits (98), Expect = 2e-13 Identities = 184/272 (68%), Gaps = 4/272 (1%) Strand=Plus/Minus Query 4987 GCCGCTGTTCGAGGCCGCGCTGCTCGTGGTGGATGAGTATTCCATGATTGACGAACAGAT 5046 |||||| | |||| ||||| || | | ||||| | || ||| | || || ||| | Sbjct 332 GCCGCTTGCCAAGGCAGCGCTCATCATCATCGATGAATGCTCGATGGTGGATGAGCAGCT 273 Query 5047 GGGGGAGGACTTGCTCAGCTTCGGTTGCCCGATCCTCGCCCTGGG-CGATCCGGGGCAGC 5105 || ||||| || | ||||| || || | || | ||||| |||||| || |||| Sbjct 272 CGGCAAGGACCTGATGAGCTTTGGCACGCCTGTTCTGGTGCTGGGGCGATCCCGGACAGC 213 Query 5106 TCCCGCCCGT---GGGCGGCACCCCCTTCTTCAAGAACAAGCCCGACATCCTGCTCACGG 5162 | ||||| || |||||| |||| | || | |||| ||| | || || ||| Sbjct 212 TTCCGCCGGTATCGGGCGGTGGTTACTTCACCGAGCAGGAGCCAGACTTTCTTCTGTCGG 153 Query 5163 AGATTCACCGCCAGGCCCAGGACAACCCGATCATCTGGATGTCCAAGGAGGTCCGCGAGG 5222 | || || || ||||| ||||||||||||| ||| | | ||| ||| || || |||| Sbjct 152 AAATCCATCGTCAGGCGAAGGACAACCCGATTATCCAGCTTGCCATGGATGTGCGAGAGG 93 Query 5223 GCCGCGTGCTCCGCCCCGGCGACTACGGGGCC 5254 | |||| | || | |||||||||||| || Sbjct 92 GACGCGAGATCATGCGTGGCGACTACGGGACC 61 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187309724175000