Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_010495.1 Length=45051 Score E Sequences producing significant alignments: (Bits) Value seq29027 109 2e-19 >seq29027 Length=2418 Score = 109 bits (120), Expect = 2e-19 Identities = 173/243 (71%), Gaps = 5/243 (2%) Strand=Plus/Plus Query 32827 CCGCCAAGCATCTGCATGACGCCACCCATTTGTGGAATGACAATCTCAGTGGTGTATTTG 32886 || || |||||||||||| ||| |||| | || | || | ||| |||||||| Sbjct 828 CCACCCAGCATCTGCATGGTGCCGCCCACGT-TG--ACAACCACCTCCGTGGTGTAACGT 884 Query 32887 TCCACGCCGCTGCTG-TCAGTCCACTTACGAGTGCGAAGTTGTCCTTCTATATAAACCTG 32945 ||| |||| ||| || ||| ||||| ||||| || || ||||| ||||| ||||| Sbjct 885 TCCTGACCGC-CCTGATCCTGCCATTTACGGGTGCGCAGCTGGCCTTCAATATACACCTG 943 Query 32946 CGACCCTTTACGAAGATACTCTCCTGCAACTTCCGCAATTTTTCCGAAGATAACAACTCG 33005 || |||||||| || || || || || |||||||| | ||| || || | || || || Sbjct 944 AGAACCTTTACGCAGGTATTCCCCCGCCACTTCCGCCAGTTTGCCAAACAGCACGACACG 1003 Query 33006 ATGCCATTCAGTATGTTCTTTCTTTTCTCCTGTTTGCTTGTCTTTCCACTGCTCAGATGT 33065 |||||||| || ||||| ||||| || || |||||||| ||| |||||| || Sbjct 1004 GTGCCATTCGGTGATCTCTTTGTTTTCACCGGTCTGCTTGTCGCGCCAGCTCTCAGAGGT 1063 Query 33066 TGC 33068 || Sbjct 1064 AGC 1066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143818722631800