Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_010811.2 Length=231255 Score E Sequences producing significant alignments: (Bits) Value seq55576 176 7e-39 seq37656 100 4e-16 seq45636 86.0 9e-12 >seq55576 Length=704 Score = 176 bits (194), Expect = 7e-39 Identities = 475/706 (67%), Gaps = 33/706 (5%) Strand=Plus/Plus Query 41402 GGCAACCACTTCATTGAACTGTGCGTGGACCAGTCGCAAGACGTGT--GGATCATGCTGC 41459 |||||||| ||||| ||| | ||| |||| | ||| | || || || ||||||||| Sbjct 1 GGCAACCATTTCATCGAAGTCTGCCTGGATGAA--GCAGGCCGCGTCTGGTTCATGCTGC 58 Query 41460 ATAGCGGTTCGCGCGGTGTGGGCAACATCATCGGCCGTCACTACATCGAGCGTGCGCAGA 41519 | |||||||||||||||||||| ||| ||||||| | | |||||| | || ||| Sbjct 59 ACAGCGGTTCGCGCGGTGTGGGTAACGCCATCGGCAACCTGTTCATCGAACTGGCCCAGG 118 Query 41520 AGGA-GTGCGGCATGTGGCACA---GCAGCCTGCCGCACAACGATCTCGCGTTCTTCCCT 41575 || |||| || ||||| || ||||||| | || || || | |||| Sbjct 119 CCGATATGCGCCA----GCACATCGCCAACCTGCCGGATCGTGACCTGGCCTACTTCGAG 174 Query 41576 GAGGACACTCCGGGCTTCAATCACTACGTCCTGTCCATGCTGTGGGCGCAGGACTTCGCT 41635 || | || | | |||| || |||| || | || ||||||||||||||||| Sbjct 175 GAAGGCAGCCAGCACTTCGATGACTATGTGGAAGCTGTGGGCTGGGCGCAGGACTTCGCC 234 Query 41636 CGGCAGAATCGTGCGGTGATGTTGCAGATCGTGATCCAAGCG--CTGCGTCGTCATCTGC 41693 |||||| || ||| ||||| |||| |||||| ||| ||| ||| ||| | Sbjct 235 AAGCAGAACCGCGCGCTGATGATGCATGCGGTGATCGCGGCGGCACGCGGCGTGATCGTC 294 Query 41694 CGGCC-TTCGAGCTGACGGAAGAGGCGGTGAACTGCCACCACAACTATTGTG-AGCAGGA 41751 || |||||| || | ||||| |||||||||||||||||||| ||| || |||| Sbjct 295 AAACCGTTCGAGGTGGCCCTGGAGGCAGTGAACTGCCACCACAACTA-CGTGCAGAAGGA 353 Query 41752 GAACCACTTCGGGCGCAACGTGTGGGTCACGCGCAAGGGTGCGGTTCGTGCACGTGAAGA 41811 |||||||| | ||| ||| || || || || ||||| || || | ||||| Sbjct 354 ACGTCACTTCGGTGAAGAGGTGCTGGTAACCCGTAAAGGCGCGGT--GT-CA-GCGAAGA 409 Query 41812 ----CGATCTGGGGATCATTCCGGGATCCATGGGTACGAAGTCGTACATCGTCAAGGGCA 41867 ||| ||||| ||||| || || |||||||| | ||| |||||||| ||| Sbjct 410 AGGGCGAACTGGGCATCATCCCCGGCTCCATGGGCGCCAAGAGCTACATCGTGCGCGGCC 469 Query 41868 AGGGCAATCCGCATTCGTACTGCTCGTGCAGTCACGGGGCAGGACGCCGTATGTCGCGCA 41927 ||| || | | ||| |||||| ||||| ||||| || || ||| ||| || | Sbjct 470 TGGGTAACGAGGAGGCGTTCTGCTCCTGCAGCCACGGCGCCGGGCGCACCATGAGCCGAA 529 Query 41928 CCGAGGCCGTCAAGCGATTCACCGTCGAA-GACCTCGT--GCAGCA-GACGCAGGGTGTT 41983 || |||| ||| |||||| ||||| || | | || || | | || |||| Sbjct 530 CCAAGGCGAAGAAGGTCTTCACCATCGAAGGATCAGATCCGCGCCACGGCTCA--GTGTG 587 Query 41984 GAATGCCCGAAGACCAAGGAAGTGCTGGATGAAAT-CCCGGCCGCGTACAAGGACATCGA 42042 ||||||| ||| | || ||| | || ||||| ||| || |||||||||||||| Sbjct 588 GAATGCCGCAAGGACGCCGACGTGATCGACGAAATAACCGATGGCCTACAAGGACATCGA 647 Query 42043 TCAGGTGATGCTTGACCA-AAGCGATCTGGTGGAAGTCGTTCATAC 42087 |||||| ||| | ||| |||| |||||||||| || || || Sbjct 648 TCAGGTAATGGACGCCCAGCCGCGAGTTGGTGGAAGTGGTGCACAC 693 >seq37656 Length=523 Score = 100 bits (110), Expect = 4e-16 Identities = 245/364 (67%), Gaps = 7/364 (2%) Strand=Plus/Minus Query 41380 GCAGCTTGGCACGCTGGGTTCCGGCAACCACTTCATTGAACTGTGCGTGGAC-CAGTCGC 41438 |||||| |||||| |||| |||||||||||||| || |||||| | ||| || || Sbjct 362 GCAGCTGGGCACGTTGGGCGGTGGCAACCACTTCATCGAGCTGTGCCTCGACGAAGAGGC 303 Query 41439 AAGACGTGTGGATCATGCTGCATAGCGGTTCGCGCGGTGTGGGCAACATCATCGGCCGTC 41498 | |||||| | |||||||| ||| |||||||| || ||||| |||||| | Sbjct 302 GCG-GGTGTGGGTGATGCTGCA-CTCGGGTCGCGCGGCGTCGGCAATGCGATCGGCAACC 245 Query 41499 ACTACATCGAGCGTGCGCAGAAGG-AGTGCGGCATGTGGCACAGCAGCCTGCCGCACAAC 41557 ||| |||| ||| ||| || ||| | |||||| ||| | || ||||||| || | Sbjct 244 ACTTCATCCAGCTTGCCAAGGAGGAAATGCGGC-GCTGGATGATCAACCTGCCGGACCAG 186 Query 41558 GATCTCGCGTTCTTCCCTGAGGACACTCCGGGCTTCAATCACTACGTCCTGTCCATGCTG 41617 || || || | | || || | || | | || | ||||||| | | || Sbjct 185 GACCTGGCCTATCTGCCGGAAGGCAGCCAGCACTACGGCGACTACGTGTTCGCGGTGGAC 126 Query 41618 TGGGCGCAGGACTTCGCTCGGCAGAATCGTGCGGTGATGTTGCAGATCGTGATCCAAGCG 41677 ||||||||| || || ||| || || | | | ||| ||| | |||| || | ||| Sbjct 125 TGGGCGCAGCGCTATGCGCGGATCAACCGCGAGATCATGATGCGCAGCGTGGTCGAGGCG 66 Query 41678 --CTGCGTCGTCATCTGCCGGCCTTCGAGCTGACGGAAGAGGCGGTGAACTGCCACCACA 41735 | || || ||| | || |||||| | || |||||||||||||||||||||| Sbjct 65 GTCCGCACGGTGATCGCCAAGCGTTCGAGGCGCAGGCCGAGGCGGTGAACTGCCACCACA 6 Query 41736 ACTA 41739 |||| Sbjct 5 ACTA 2 >seq45636 Length=1761 Score = 86.0 bits (94), Expect = 9e-12 Identities = 68/78 (87%), Gaps = 3/78 (4%) Strand=Plus/Plus Query 186528 ATGGTCCGAGTGAGAG-GATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTAA 186586 |||||| ||||| ||| ||||||||| ||||||| ||| ||||||| ||| ||||||| Sbjct 1213 ATGGTCGGAGTG-GAGAGATTCGAACTCCCGACCCTCTGGTCCCAAACCAGATGCGCTA- 1270 Query 186587 CCAGACTGCGCTACACTC 186604 |||||||||||||||||| Sbjct 1271 CCAGACTGCGCTACACTC 1288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 738682907420000