Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_010945.1 Length=39136 Score E Sequences producing significant alignments: (Bits) Value seq115158 192 1e-44 >seq115158 Length=1188 Score = 192 bits (212), Expect = 1e-44 Identities = 371/541 (69%), Gaps = 25/541 (5%) Strand=Plus/Plus Query 35236 CGTAACGGTACAGACGGTACAGGAGACTGTTCAGGAACTATTTCCCAAGCTCTGAAAGAC 35295 || ||||| |||||||||||| ||||| || || | || || ||||| || ||||| Sbjct 607 CGCAACGGAGCAGACGGTACAGCTGACTGCTCTGGTTCCATATCACAAGCCCTAAAAGAA 666 Query 35296 AATGGATTCGCTATCCAAGGATTGCCATCAACTGTGACCCTTGGCTCTCAATTGGCAAGA 35355 ||| | | ||| ||||| | ||||| ||||| || || || ||| | || | | Sbjct 667 GCTGGTATTGGTATTCAAGGTCTACCATCTACTGTTACACTAGGTCAACAACTTGCCAAA 726 Query 35356 GTTGGCTGGGTACGCATCAGCAGAAACGAAGATTGGAACGCTCAACGCAACGACATTGTC 35415 ||| | || | || | || |||||||| | ||| ||| ||||| Sbjct 727 AATGGATTCTATCGAGTAAGTATTAATCAAGATTGGGATGCTTTGACAGGCGATATTGTG 786 Query 35416 ATGATGTCATGGAGCGCAGACATGGCAGGTTCTGGCGGAGCTGGCGGGCACGTCGGAGCA 35475 | ||||||||| | | || ||| | |||||||||||||| |||||||| || | Sbjct 787 TTAATGTCATGGGGTTCTGATATGTCCACATCTGGCGGAGCTGGAGGGCACGTTGGTGTC 846 Query 35476 ATGCTAGATTCGGTTAACTTTATCAGTTGTGACTACTCAACTCAAGGAGCGCCTGGACAA 35535 ||| | ||| | ||||||| ||||| || || ||||||||||| || ||||| ||| Sbjct 847 ATGATGGATGCTACATACTTTATTAGTTGCGATTATTCAACTCAAGGGGCACCTGGGCAA 906 Query 35536 GCTATCAATACTTATCCGTGGGATTACTACTATAATGCTAATAATCCAACTTATATTGAG 35595 |||||||||||||| |||||| || |||||||| || || || || | ||||| ||| Sbjct 907 GCTATCAATACTTACCCGTGGAATGACTACTATGCAGCGAACAAGCCTGCATATATCGAG 966 Query 35596 GTGTGGCGCTACAATGGCAACGCACCAGAAA-----AACCATTGCCTAACACAGCAGTGG 35650 |||||||| || || || ||||| ||| ||||| |||| |||||| | Sbjct 967 GTGTGGCGTTATTCTGACACTGCACCGCAAACCAACAACCA--AGCTAATACAGCA---G 1021 Query 35651 CTCCGTCTGACTCACGCAAGCCAAGTAGCAAGGCTTACTATTTGGCAAATGACGTTCAAC 35710 || ||| | | ||| ||| |||||||||||| || ||||| |||||| Sbjct 1022 CT-----AGACAC-CACAA--CAA-----AAGGCTTACTATGAAGCTAATGAAGTTCAAT 1068 Query 35711 TTGTTAA-CGATATTTACCAAATCAAATGTGATTATCTATGTCCT-GTTGGTTTCGACTG 35768 | ||||| | |||| || ||||||||||| ||| | ||| ||||| |||||||| Sbjct 1069 TCGTTAATGGGAATTTGGCAGATCAAATGTGACTATTTGGCACCTGGTTGGATTCGACTG 1128 Query 35769 G 35769 | Sbjct 1129 G 1129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124920010162800