Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_011103.1 Length=60195 Score E Sequences producing significant alignments: (Bits) Value seq79742 86.0 2e-12 >seq79742 Length=347 Score = 86.0 bits (94), Expect = 2e-12 Identities = 152/218 (70%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 2880 GTCGGTCTGGATCCAGCCAAGGGACAGATGATCGAGGCTCGCCGCTTCCAAGTAGAAGAA 2939 ||||| | ||||| | |||||| ||||||| |||||| || | ||||| | | || Sbjct 282 GTCGGCATCGATCCCGACAAGGGTCAGATGACCGAGGCGCGGCTGTTCCAGATCCAGGAG 223 Query 2940 ATCGCCAGGGTCTGGCAGTTGCCTCCTGTGTTTTTGCAGGATCTCA-GCCGCGCGACGTT 2998 ||||| | | | | |||| || ||||| |||||||||| | | || ||||| Sbjct 222 ATCGCGCGCCTTTACGGGCTGCCGCCGGTGTTCCTGCAGGATCTGTCGAAGGGC-ACGTT 164 Query 2999 CAGCAACGTCGAGCAGCAAGATTTGCACCTTGTCAAGCACCTTATCGGCCAGTGGGCCAG 3058 ||||||| ||||||||| || | || || || |||||||| | || |||| | | Sbjct 163 CAGCAACACCGAGCAGCAGGACCTCCAGCTCGTGAAGCACCTCGTGCTGCATTGGG-CGG 105 Query 3059 GGCGCTCGAGGATGAAATGAATCTCAAGATGTTCGGCC 3096 | ||||| | || |||| |||||| ||||||||| Sbjct 104 TGATTTCGAGCAGGAGCTGAACCTCAAGCTGTTCGGCC 67 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 192204538630200