Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_011271.1 Length=155372 Score E Sequences producing significant alignments: (Bits) Value seq8276 93.3 4e-14 seq54514 91.5 1e-13 seq44855 82.4 8e-11 >seq8276 Length=3740 Score = 93.3 bits (102), Expect = 4e-14 Identities = 113/153 (74%), Gaps = 1/153 (1%) Strand=Plus/Minus Query 115014 TGCCTGTGCGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGC 115073 |||| || |||||| ||||| ||||| | | ||||| |||||| ||||||| | Sbjct 811 TGCCGGT-CGGCCCCGGCCGGGGCTCGGGTGCCGGCTCCCTGGTCGCCTACGTACTCAAG 753 Query 115074 ATCACCTCGATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGAC 115133 |||||| |||| ||| | || |||||| |||||||||||||| ||||||| || Sbjct 752 ATCACCGACCTCGATCCGCTGGCCTATGACCTGCTGTTCGAGCGCTTCCTCAACCCCGAA 693 Query 115134 CGCCCCGACTTCCCCGACATCGACGTCGACTTC 115166 || | | | |||||| |||||||||||||| Sbjct 692 CGGATCTCCATGCCCGACTTCGACGTCGACTTC 660 >seq54514 Length=408 Score = 91.5 bits (100), Expect = 1e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 92217 CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTCGAA 92276 |||||||||| ||||| ||| |||||||| ||| ||||| ||| |||||||||||||| Sbjct 292 CGGGGTGTAGCTCAGTCTGGTAGAGCGCTACGTTCGGGACGTAGAGGTCGCAGGTTCGAA 351 Query 92277 TCCTGTCACCCCGAC 92291 ||||||| ||||||| Sbjct 352 TCCTGTCTCCCCGAC 366 >seq44855 Length=668 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 92217 CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTCGAA 92276 |||||||| | ||| |||| || |||||| ||| ||||| |||| | ||||||||| || Sbjct 438 CGGGGTGTGGCGCAGCTTGGTAGCGCGCTTCGTTCGGGACGAAGAGGCCGCAGGTTCAAA 379 Query 92277 TCCTGTCACCCCGAC 92291 ||||||||||||||| Sbjct 378 TCCTGTCACCCCGAC 364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496252809616000