Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_011373.1 Length=46872 Score E Sequences producing significant alignments: (Bits) Value seq4145 118 3e-22 seq49783 96.9 1e-15 seq37297 82.4 2e-11 >seq4145 Length=6487 Score = 118 bits (130), Expect = 3e-22 Identities = 67/68 (99%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 26356 ACGGATTCGAAATCCGTTGAGTCAGCAATGGCTCCTAGGGTTCAAATCCCTATCTCTCCG 26415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3571 ACGGATTCGAAATCCGTTGAGTCAGCAATGGCTCCTAGGGTTCAAATCCCTATCTCTCCG 3630 Query 26416 CCATATAC 26423 ||| |||| Sbjct 3631 CCAAATAC 3638 >seq49783 Length=1506 Score = 96.9 bits (106), Expect = 1e-15 Identities = 59/63 (94%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 26356 ACGGATTCGAAATCCGTTGAGTCAGCAATGGCTCCTAGGGTTCAAATCCCTATCTCTCCG 26415 ||||||||||||||||||| |||||||||||| |||||||||| |||||||||||| ||| Sbjct 1454 ACGGATTCGAAATCCGTTGTGTCAGCAATGGCACCTAGGGTTCGAATCCCTATCTCCCCG 1395 Query 26416 CCA 26418 ||| Sbjct 1394 CCA 1392 >seq37297 Length=2184 Score = 82.4 bits (90), Expect = 2e-11 Identities = 47/48 (98%), Gaps = 0/48 (0%) Strand=Plus/Minus Query 26376 GTCAGCAATGGCTCCTAGGGTTCAAATCCCTATCTCTCCGCCATATAC 26423 ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 120 GTCAGCAATGGCTCCTAGGGTTCAAATCCCTATCTCTCCGCCAAATAC 73 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149636906132400