Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq2641 87.8 1e-12 seq28556 84.2 2e-11 >seq2641 Length=263 Score = 87.8 bits (96), Expect = 1e-12 Identities = 143/205 (70%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | || | ||| | ||| || ||||| ||||| || |||||||||||| Sbjct 246 CCACCACGAAGTCGAAGAACCAGATGCAGAGTAGATTCTTTCTGAATGTTGTAATCGGCA 187 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || ||| | ||||| || || || ||||| | || | || ||||| ||| ||| Sbjct 186 AGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAGATGAGTCGTTGTTGATCGGGGGGA 127 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| || |||| |||| ||| | || |||||||| | ||| || Sbjct 126 ATACCCTCCTTGTCTTGAA-TTTGGTTTTGACATTGTCGATAGTATCCGAAGATTCAACT 68 Query 15130 TCTAAGGTAATGGTTTTACCTGTCA 15154 || | ||| || || || || |||| Sbjct 67 TCAAGGGTGATAGTCTTGCCGGTCA 43 >seq28556 Length=388 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || ||||||||||| || ||||| ||||||||||| ||| | | | ||||| Sbjct 74 ACCAAGTGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAGAGGGTACGGCCATCTTCC 133 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || || || ||| | || | |||||| ||||| ||||| ||||| ||||| Sbjct 134 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCTTTGTCCTGG 193 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || || ||| | || || ||||| | ||||| |||| || ||||| || Sbjct 194 ATCTTCGACTTGACATTGTCAATGGTATCCGAAGACTCTACTTCTAGCGTGATGGTCTTG 253 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || || || || || |||||||| Sbjct 254 CCGGTGAGGGTCTTGACGAAGATTTGCAT 282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356824450335500