Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_011756.1 Length=66390 Score E Sequences producing significant alignments: (Bits) Value seq54635 105 3e-18 seq54636 95.1 5e-15 >seq54635 Length=814 Score = 105 bits (116), Expect = 3e-18 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 35336 CATCGCGGCCTACCTCGCCAACATCGGCGTCGAGTCCGGCGGACTGGTAAGTCTGGTGGA 35395 |||| | |||| ||||| | | |||| ||||||||||| |||| | ||||| || Sbjct 253 CATCTCTGCCTTCCTCGGCCAGTGCGGCCACGAGTCCGGCGAACTGACCCGCCTGGTCGA 194 Query 35396 GAATCTCAACTACAGCGCCCAAGGGTTGGCCAACACCTGGCCGCGCCGGTACGCAGTAGA 35455 ||| || |||||||||||||| || ||||||||| ||||||| |||||||||| | || Sbjct 193 GAACCTGAACTACAGCGCCCAGGGCCTGGCCAACAACTGGCCGAGCCGGTACGCCATCGA 134 Query 35456 CCCGCG 35461 |||||| Sbjct 133 CCCGCG 128 >seq54636 Length=518 Score = 95.1 bits (104), Expect = 5e-15 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 35336 CATCGCGGCCTACCTCGCCAACATCGGCGTCGAGTCCGGCGGACTGGTAAGTCTGGTGGA 35395 ||| || |||||| ||||| | ||| |||||||||| ||| | |||||||| Sbjct 431 CATGGCTGCCTACATCGCCCAGTGCGGTCACGAGTCCGGCAAGCTGACCCGCCTGGTGGA 372 Query 35396 GAATCTCAACTACAGCGCCCAAGGGTTGGCCAACACCTGGCCGCGCCGGTACGCAGTAGA 35455 || ||||||||||||||||| || ||||||| |||||||| |||| ||||| || || Sbjct 371 AAACCTCAACTACAGCGCCCAGGGCCTGGCCAAAACCTGGCCCAGCCGCTACGCCGTGGA 312 Query 35456 CCCGCGAGTCCG 35467 ||||| | ||| Sbjct 311 TCCGCGTGCCCG 300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 211986024123300