Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_011810.1 Length=65764 Score E Sequences producing significant alignments: (Bits) Value seq54636 118 4e-22 >seq54636 Length=518 Score = 118 bits (130), Expect = 4e-22 Identities = 198/286 (69%), Gaps = 8/286 (3%) Strand=Plus/Minus Query 35123 CATCGCGGCTTACCTCGCCAACATCGGTGTCGAATCCGGTGGACTGGTGAGTCTGGTGGA 35182 ||| || || ||| ||||| | |||| ||| ||||| ||| | |||||||| Sbjct 431 CATGGCTGCCTACATCGCCCAGTGCGGTCACGAGTCCGGCAAGCTGACCCGCCTGGTGGA 372 Query 35183 GAATCTCAACTACAGCGCTCAAGGACTGGCCAACACTTGGCCGCGCCGATATGCCGTGGA 35242 || |||||||||||||| || || |||||||| || ||||| |||| || |||||||| Sbjct 371 AAACCTCAACTACAGCGCCCAGGGCCTGGCCAAAACCTGGCCCAGCCGCTACGCCGTGGA 312 Query 35243 CCCGCGTGTCCGTCCGTATGTACCGAACGCTCTGGCGAACCGCCTGGCTCGCAATCCGGT 35302 ||||||| ||| | ||||||| ||| ||||| ||||||| |||| Sbjct 311 TCCGCGTGCCCGGGAGCTGAGGCCGAACGAGTTGG----CCGCCAGGCTCGCGCGCCGGC 256 Query 35303 C----GCCATCGCCAACAACGTGTACGCTGACCGCATGGGTAATGGATGCGAGCAGGACG 35358 | || ||||||||||||| || || |||||| || ||||| || || Sbjct 255 CGGAAGCGATCGCCAACAACGCCTATGCCAACCGCAACGGGAATGGCCCGGAATCTTCCG 196 Query 35359 GGGACGGCTGGAAGTATCGCGGTCGCGGACTGATTCAGCTGACCGG 35404 | || ||||||||||| || || | |||||| | ||| | ||||| Sbjct 195 GCGATGGCTGGAAGTACCGGGGCAGGGGACTGCTGCAGGTCACCGG 150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 209986005267500