Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq28556 100 3e-16 seq79110 87.8 2e-12 >seq28556 Length=388 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || || |||||||| || || ||||| || ||| ||| |||| || Sbjct 80 TGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAGAGGGTACGGCCATCTTCCAGCTGC 139 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 ||||| ||| | || | || ||||||||||| |||||||||||||| || || || || Sbjct 140 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCTTTGTCCTGGATCTTC 199 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 |||| || | ||| || |||||||| ||||| || || | || |||||||| Sbjct 200 GACTTGACATTGTCAATGGTATCCGAAGACTCTACTTCTAGCGTGATGGTCTTGCCGGTG 259 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 || || || || || |||||||| Sbjct 260 AGGGTCTTGACGAAGATTTGCAT 282 >seq79110 Length=913 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC 122957 ||||| ||||| || ||||| ||| ||||||| |||||| | || | ||||| Sbjct 695 AAGGTTGCCGAGCGCCCACAACACATGATCATGCGTGTCGCTGTCGGTATTCACGGCGAG 754 Query 122958 GACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017 || |||||||| || | |||||| ||||| | ||||| ||||| | || || || || Sbjct 755 GATATCGAAAAGGCCATCGAAACGTACGACTACATGTCACAAAAGTACTTTACTCATGCC 814 Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTC 123077 || || | ||| ||||||||| | ||| ||| |||| || || ||| || | Sbjct 815 TCCCCAACGCTTTTCAACGCCGGCACCCCTTCGCCGCAGATGTCATCTTGCTTTCTGATT 874 Query 123078 ACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAAC 123115 | || || |||||||| ||||||||||| || Sbjct 875 GACATGAAGGAGGACAGCATTGATGGTATCTATGACAC 912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451266999788000