Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_012749.1 Length=88487 Score E Sequences producing significant alignments: (Bits) Value seq66202 107 1e-18 >seq66202 Length=972 Score = 107 bits (118), Expect = 1e-18 Identities = 212/310 (68%), Gaps = 9/310 (3%) Strand=Plus/Plus Query 87337 GGAGCTATTAAGACTCTGTATAACATCTTTGGAGGAACTATTAACTCTAAAGGTTTTAAG 87396 ||| || || || ||||| | |||||||| || ||||||||||||||| ||| Sbjct 632 GGATCTGTTCAGGTTCTGTGGGAAATCTTTGGTGGTGAAGTTAACTCTAAAGGTTACAAG 691 Query 87397 GTACTGGATGAGCACATTGGACTTATCTATGGCGACTCTATCACGTTGGAACGTGCAAAC 87456 || || ||| ||| |||| | |||||||| || || ||||| || |||| || | Sbjct 692 GTTCTTGATACACACGTTGGTGTAATCTATGGTGATTCAATCACTCTGAAACGCGCCACT 751 Query 87457 GAAATCCTGAAGCGTCTGTATGAAATGGGGTTTGCAAGCTCTAACGTGGTGTTTGGTGTA 87516 |||||| | | || || | | | || |||||| ||| | || || ||| | Sbjct 752 GAAATCTTTGAACGCTTGGAAGCTAAAGGTTTTGCATCAAGTAATATTGTATTCGGTATT 811 Query 87517 GGCTCTTACACTTACCAGTACATGACTCGTGACACCTTTGCATTTGC-TGTCAAAGCAAC 87575 || || |||||| | |||| || ||||||||||||| ||||| ||| |||||||| Sbjct 812 GGTAGCTATACTTACAACTACAATACACGTGACACCTTTGGTTTTGCATGT-AAAGCAAC 870 Query 87576 TCTTGCAAGCATTGGTGGCAAAGAGATTATGCTTGCAAAAGACCCTAAAACAGATAGTGG 87635 | | ||| ||||| ||| ||||||| || | ||||| || ||||| || Sbjct 871 TGGTTCAATCATTGATGGTGAAGAGATCCTGGTGAGTAAAGAGCC-AAAAC------TGA 923 Query 87636 TGTTAAGAAA 87645 |||||||||| Sbjct 924 TGTTAAGAAA 933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 282584133798400