Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq45636 91.5 2e-13 seq83917 87.8 2e-12 seq61628 84.2 3e-11 seq33148 82.4 9e-11 >seq45636 Length=1761 Score = 91.5 bits (100), Expect = 2e-13 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 32009 TGGCGACTCAAGTAGGATTCGAACCTACGACCGACTGCTTAGAAGGCAGTTGCTCTATCC 32068 ||||||| | | |||| |||||||| ||||| ||||||||||||||||||||||||||| Sbjct 37 TGGCGACCCCTGCAGGACTCGAACCTGCGACCTACTGCTTAGAAGGCAGTTGCTCTATCC 96 Query 32069 AGCTGAGCTA 32078 || ||||||| Sbjct 97 AGTTGAGCTA 106 >seq83917 Length=859 Score = 87.8 bits (96), Expect = 2e-12 Identities = 74/90 (82%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 31291 GCGGAGAGGGTGGGATTCGAACCCACGGAGGCTTTCACC--TCGCTAGTTTTCAAGACTA 31348 ||||| ||||||||||||||||||| | | || || ||||||||||||||||||| Sbjct 170 GCGGAAGCGGTGGGATTCGAACCCACGAACGAGTTACCCCGTCGCTAGTTTTCAAGACTA 111 Query 31349 GAGCCTTCAACCACTCGACCACCTCTCCAT 31378 | ||||||||||||||| |||| ||||| Sbjct 110 GTGCCTTCAACCACTCGGCCACGCTTCCAT 81 >seq61628 Length=656 Score = 84.2 bits (92), Expect = 3e-11 Identities = 69/82 (84%), Gaps = 3/82 (4%) Strand=Plus/Minus Query 176118 AGTATGG-GCAGGGAG--GGATTTGAACCCCCGTAGGCAGAGCCAGCGGATTTACAGTCC 176174 || |||| | |||||| ||||||||||| ||||||| |||||| |||||||||||||| Sbjct 576 AGAATGGTGGAGGGAGTTGGATTTGAACCAACGTAGGCTGAGCCAACGGATTTACAGTCC 517 Query 176175 GCCTCCATTAACCACTCGGACA 176196 | | || |||||||||||| || Sbjct 516 GTCCCCTTTAACCACTCGGGCA 495 >seq33148 Length=515 Score = 82.4 bits (90), Expect = 9e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 32009 TGGCGACTCAAGTAGGATTCGAACCTACGACCGACTGCTTAGAAGGCAGTTGCTCTATCC 32068 ||||||| | ||||| |||||||||||||| | ||||||||||| | |||||||||| Sbjct 285 TGGCGACCCCGGTAGGGCTCGAACCTACGACCTGCCGCTTAGAAGGCGGCTGCTCTATCC 226 Query 32069 AGCTGAGCTA 32078 |||||||||| Sbjct 225 AGCTGAGCTA 216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621111514232000