Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_013594.1 Length=37235 Score E Sequences producing significant alignments: (Bits) Value seq41978 134 3e-27 seq61333 120 7e-23 >seq41978 Length=891 Score = 134 bits (148), Expect = 3e-27 Identities = 182/254 (72%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 35292 GGTGACACACTGGTTGTCTGGAAACTGGATCGCCTCGGGCGAAGCATGAAACATCTGATT 35351 || || || ||||| || ||||| |||||||| || || || |||||| |||||| | Sbjct 838 GGCGATACTCTGGTGGTGTGGAAGCTGGATCGGCTTGGCCGCAGCATGCGTCATCTGGTC 779 Query 35352 TCCCTCGTCGGGGAACTACGGGAGCGAGGGATTAATTTTCGCAGTCTTACCGACAGCATA 35411 ||| | ||| || || || || || | ||||| || || || || |||||||| Sbjct 778 ATGCTCACTGAGGAGCTGCGTGAACGTGGAGTCAATTTCCGTAGCCTGACGGACAGCATC 719 Query 35412 GACACATCTTCTCCAATGGGGCGTTTTTTCTTCCACGTTATGGGTGCCCTGGCTGAAATG 35471 ||||| | || ||||| ||||||||||| || || ||||| |||||||| |||||| Sbjct 718 GACACCAGCACGCCGATGGGACGTTTTTTCTTTCATGTGATGGGCGCCCTGGCGGAAATG 659 Query 35472 GAACGAGAACTAATCATCGAGCGAACGATGGCTGGACTTGCTGCCGCCAGAAATAAAGGC 35531 || || ||| | ||| | || || ||| || || || | || || || | ||||| Sbjct 658 GAGCGTGAATTGATCGTTGAACGCACGCGAGCGGGCCTCTCCGCTGCGCGAGAAAAAGGA 599 Query 35532 CGTATTGGTGGGCG 35545 || ||||||||||| Sbjct 598 CGCATTGGTGGGCG 585 >seq61333 Length=826 Score = 120 bits (132), Expect = 7e-23 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 35292 GGTGACACACTGGTTGTCTGGAAACTGGATCGCCTCGGGCGAAGCATGAAACATCTGATT 35351 || || || || || || ||||| |||||||| || || || |||||| |||||| | Sbjct 54 GGCGATACCCTTGTGGTGTGGAAGCTGGATCGGCTTGGCCGCAGCATGCGTCATCTGGTC 113 Query 35352 TCCCTCGTCGGGGAACTACGGGAGCGAGGGATTAATTTTCGCAGTCTTACCGACAGCATA 35411 ||| | ||| || || || || || | ||||| || || || || |||||||| Sbjct 114 ATGCTCACTGAGGAGCTGCGTGAACGCGGAGTCAATTTCCGTAGCCTGACAGACAGCATC 173 Query 35412 GACACATCTTCTCCAATGGGGCGTTTTTTCTTCCACGTTATGGGTGCCCTGGCTGAAATG 35471 || || | || ||||||||||||||||| ||||| |||||||| ||||| || ||| Sbjct 174 GATACCAGCACGCCGATGGGGCGTTTTTTCTTTCACGTGATGGGTGCGCTGGCGGAGATG 233 Query 35472 GAACGAGAACTAATCATCGAGCGAAC 35497 ||||| ||| ||||| | || || || Sbjct 234 GAACGCGAATTAATCGTTGAACGCAC 259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118846222774200