Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_013598.1 Length=35525 Score E Sequences producing significant alignments: (Bits) Value seq115158 1274 0.0 seq125025 697 0.0 seq124472 365 1e-96 seq123790 318 1e-82 seq115959 86.0 1e-12 >seq115158 Length=1188 Score = 1274 bits (1412), Expect = 0.0 Identities = 1007/1193 (84%), Gaps = 16/1193 (1%) Strand=Plus/Plus Query 21635 GTAATACTTCCTATATGTATTTCAAGTGCGAGTTTCTATTTTTCCAGTCAGTCACGCGCC 21694 || || || || || | ||||||||||||||||| |||||||| || |||||||||||| Sbjct 1 GTTATTCTCCCCATTTCCATTTCAAGTGCGAGTTTTTATTTTTCAAGCCAGTCACGCGCC 60 Query 21695 TCTCGTTTAGAACATCGAATCA-CTAAATTAGAGGTCGTCGACCATGAAATCGAGAAAAT 21753 |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct 61 TCTCGTTTAGAACATCGAATCAGCTAAATTAGAGGTCGTTGACCATGAAATCGAGAAAAT 120 Query 21754 TATTAAAAACCATAATGATCGTCTTGACAAATATCAAGAAGAACAAAAAATAATTCTAGC 21813 ||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||| Sbjct 121 TATTAAAAACCATAATGATCGTCTTGACAAACATCAAGAAGACCAAAAA-TAATTCTAGC 179 Query 21814 TCTCGTCCAACGTATGGACCATCTTAACGAAAACATCGGAGAGCTTAAAGGAGATATTGA 21873 ||| |||||| | ||||||||| |||| || ||| | | ||||| |||||| |||| || Sbjct 180 TCTGGTCCAAAGAATGGACCATATTAATGAGAACGTTGTTGAGCTAAAAGGAAATATAGA 239 Query 21874 GGAAATTAAAAAATTAGTAGATAGAAATTTGAGAGGATGAAGAATAAATGATTAATTTAA 21933 ||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||| | Sbjct 240 AGAAGTTAAAAAATTAGTAGATCGAAACTTGAGAGGATGAAGAATAAATGATTAATTTTA 299 Query 21934 AATTACGTTTGCAAAATAAAACTACATTAGTAGCTCTAATTTCAGCAGTATTCCTTATGT 21993 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct 300 AATTACGTTTGCAAAATAAAACTACACTAGTAGCTCTTATCTCAGCAGTATTCCTTATGT 359 Query 21994 TGCAACAGTTCGGGCTTCACATTCCGACCAACATTCAAGAGGGAGTAAATACCTTTGTGG 22053 ||||||| || |||||| | ||||| ||| || ||||| | |||||||| || | | Sbjct 360 TGCAACAATTAGGGCTTGAAATTCCACACAATATCCAAGACGCTGTAAATACATTCATTG 419 Query 22054 GAATTTTGGTTATCCTCGGAATCGTTACCGACCCAACAACTAAAGGAATTGCTGACAGTG 22113 |||||||||||||||||||||||||||||||||||| ||||| || ||||| ||||| | Sbjct 420 CAATTTTGGTTATCCTCGGAATCGTTACCGACCCAACCACTAAGGGGATTGCAGACAGCG 479 Query 22114 AACGAGCATTGAACTATGATGTACCACTAAACGATAAA-AAGGAGAAATAAAATGAGCG- 22171 |||||||||||| |||||| ||||||| |||| || ||||| ||||| ||||||| Sbjct 480 AACGAGCATTGAGCTATGAACAACCACTAGACGAAAAGGAAGGA-AAATAGTATGAGCGA 538 Query 22172 TACCACAATCTATTGTTAATTGGTTTGTTATTCACCG---CAATCTGCTTACCTACTCAA 22228 ||| |||||||||||| ||||||||||||| || || ||| || ||||| |||| Sbjct 539 TACAACAATCTATTGTAAATTGGTTTGTTAACCATCGAGGCAAATTG---ACCTATTCAA 595 Query 22229 TGTTTGGCTCACGGAATGGCTCAGACGGTACAGCTGACTGCTCTGGTTCTATGTCTCAAG 22288 ||| ||| ||||| || || |||||||||||||||||||||||||||| || || |||| Sbjct 596 TGTATGGGTCACGCAACGGAGCAGACGGTACAGCTGACTGCTCTGGTTCCATATCACAAG 655 Query 22289 CCCTAAAAGACGCAGGCATTCCTATCCAAGGGTTGCCATCTACTGTCACTCTTGGTCAAC 22348 |||||||||| || || ||| ||| ||||| | ||||||||||| || || ||||||| Sbjct 656 CCCTAAAAGAAGCTGGTATTGGTATTCAAGGTCTACCATCTACTGTTACACTAGGTCAAC 715 Query 22349 AACTTGCTAAAAATGGATTTTATCGTGTAAGTATTAATCAGGATTGGGAAGCCTTGGCAG 22408 ||||||| ||||||||||| ||||| |||||||||||||| |||||||| || ||| ||| Sbjct 716 AACTTGCCAAAAATGGATTCTATCGAGTAAGTATTAATCAAGATTGGGATGCTTTGACAG 775 Query 22409 GTGACATCATCTTGATGTCTTGGGGTGCTGATATGTCCACATCTGGTGGTGCAGGTGGAC 22468 | || || | || ||||| |||||| ||||||||||||||||||| || || || || | Sbjct 776 GCGATATTGTGTTAATGTCATGGGGTTCTGATATGTCCACATCTGGCGGAGCTGGAGGGC 835 Query 22469 ATGTTGGTGTCATGATGGATAGTGTAAACTTCATTAGTTGTGATTATTCAACTCAAGGAG 22528 | |||||||||||||||||| | | |||| |||||||| ||||||||||||||||| | Sbjct 836 ACGTTGGTGTCATGATGGATGCTACATACTTTATTAGTTGCGATTATTCAACTCAAGGGG 895 Query 22529 CAGTAGGCCAAGCTATCAATACGTATCCTTGGAATGATTACTATGCAGCAAACAAACCAA 22588 || || |||||||||||||| || || |||||||| ||||||||||| ||||| || Sbjct 896 CACCTGGGCAAGCTATCAATACTTACCCGTGGAATGACTACTATGCAGCGAACAAGCCTG 955 Query 22589 ATTATATCGAAGTTTGGCGATATGCTGAATCAGCACCACAAACGAATAACCAAGCTAATA 22648 |||||||| || ||||| ||| |||| | ||||| ||||| || ||||||||||||| Sbjct 956 CATATATCGAGGTGTGGCGTTATTCTGACACTGCACCGCAAACCAACAACCAAGCTAATA 1015 Query 22649 CTGC-GGTAG-TGCCACAACAAAAGGCTTACTATGAAGCAAATGAAGTCAAATATGTTAA 22706 | || | ||| |||||||||||||||||||||||||| |||||||| ||| ||||| Sbjct 1016 CAGCAGCTAGACACCACAACAAAAGGCTTACTATGAAGCTAATGAAGTTCAATTCGTTAA 1075 Query 22707 -CGGTATCTGGCAGATTAAGTGCGACTATCTATGTCC-AATTGGGTTCGACTGGGTTAAC 22764 || || |||||||| || || |||||| | || |||| ||||||||||||||| Sbjct 1076 TGGGAATTTGGCAGATCAAATGTGACTATTTGGCACCTGGTTGGATTCGACTGGGTTAAC 1135 Query 22765 TAATTTTCGGCTCAGTATAAACTAAGT-GAACGCAAACAAAGCGGTGTCATGC 22816 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1136 TAATTTTCGGCTCAGTATAAACTAAGTGGAACGCAAACAAAGCGGTGTCATGC 1188 >seq125025 Length=589 Score = 697 bits (772), Expect = 0.0 Identities = 515/589 (87%), Gaps = 9/589 (2%) Strand=Plus/Minus Query 18587 TCAAGATTTCGTTAACTCAAACAACGCCAATCGTGCTCAAGCTGAAAAG-GCTCTGGCAG 18645 |||| |||| |||||| ||||||| ||||||||||| |||||||||||| | | | || | Sbjct 589 TCAAAATTTTGTTAACGCAAACAATGCCAATCGTGCACAAGCTGAAAAGAGATTTAGCTG 530 Query 18646 ATGCAAGTGCACGAGTAGTTAAACTAGAAAATA-ACTTAAAC-GATATGTCAGAGCGTTG 18703 |||||||||| || ||| |||||||||||| ||||||| ||||||||||| ||| | Sbjct 529 ATGCAAGTGCTCGTGTAACTAAACTAGAAAACGTACTTAAAATGATATGTCAGAACGT-G 471 Query 18704 GAATTTTATCGATAACTATATGGCAGTATCAAATGATGGTCTTGTTGTTGGTAAAACGGA 18763 |||||||||||||| ||| ||||||| ||||||||| ||||||||| ||||||||| | | Sbjct 470 GAATTTTATCGATAGCTACATGGCAGCATCAAATGAAGGTCTTGTTATTGGTAAAAAG-A 412 Query 18764 TAATTCTAGTTCTATGCTATTTAGTCCAAACGGGCGCATCTCAATGTTCTCAGCCGGGCA 18823 | | || || ||||| | || | |||||||||||| |||||||||| |||||| ||| | Sbjct 411 TGAATCAAGCTCTATCATGTTCAATCCAAACGGGCGTATCTCAATGT-CTCAGCTGGGAA 353 Query 18824 CGAGGT-AATGTATA-TCTCGCAAGGTGTGATTCATATTGAAAATGGTATTTTCTCGAAA 18881 |||||| |||||| | | || ||||| | || ||||| ||||| ||||||||||| ||| Sbjct 352 CGAGGTTAATGTACAATTTCAAAAGGTATCATCCATATCGAAAACGGTATTTTCTCTAAA 293 Query 18882 ACTATCCAAATCGGAAGGTATCGAGAGGAACAAGATTTATTGAATCCAGACCGTAATGTC 18941 |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct 292 TCTATCCAAATCGGACGATATCGAGAGGAACAAGATTTATTGAATCCAGACCGTAATGTC 233 Query 18942 ATTAGATACGTAGGAGGTGCATAATGGCTGAATTTTGGAGTAATAACGACCGTGGATATC 19001 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 232 ATTAGATACGTAGGAGGTGCATAATGGCTGAATTTTGGAGTAATA-CGACCGTGGATATC 174 Query 19002 GTATCCGTCTTTGGGTTGACCAGGTTGGTCAAGATATCCAAAACAATACAAGTCAAGTTA 19061 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 173 GTATCCGTCTTTGGGTCGACCAGGTTGGTCAAGATATCCAAAACAATACAAGTCAAGTTA 114 Query 19062 GACTACGACTGGCACTATTAAATACAACAACCACTTTCGCTCAATATCAATGTAGTGCTT 19121 || | ||| | || || ||||||| ||||| || || |||||||||||||||||||||| Sbjct 113 GATTGCGATTAGCGTTACTAAATACGACAACTACGTTTGCTCAATATCAATGTAGTGCTT 54 Query 19122 TTGTCGAGTTTAATGGTCAACGATTGAATTGGTCAGGTTCTCCTAGCGT 19170 |||||| ||||| |||||||||||||||||||| ||||| |||||||| Sbjct 53 ATGTCGAATTTAACGGTCAACGATTGAATTGGTCTGGTTCACCTAGCGT 5 >seq124472 Length=297 Score = 365 bits (404), Expect = 1e-96 Identities = 258/295 (87%), Gaps = 0/295 (0%) Strand=Plus/Plus Query 19337 CCAAGAGGGAGCACGGTAAGTGTATCAGATGGGTTTATCGGAAAACAAGTAGATATCGCT 19396 ||||| || ||| |||| || || || |||||||| || || || |||||||| ||| || Sbjct 3 CCAAGGGGAAGCTCGGTGAGAGTGTCTGATGGGTTCATTGGCAATCAAGTAGACATCTCT 62 Query 19397 ATCAACCGAAAACTAGGTGGTGCTACACATACACTACGCTATTCTTGGGGAAACAAGCAA 19456 ||| | |||| ||||| | ||||||||||||||||||||||||||| ||||| ||| Sbjct 63 ATCGATAAAAAAGTAGGTAGCGCTACACATACACTACGCTATTCTTGGTACAACAAACAA 122 Query 19457 GGTGAAATTGCCAATAATGTTGGAACGTCGTTTAGATGGACAATTCCAGAAGATTTCGCT 19516 ||| |||||||| | |||||||||||||||| || ||||||||| ||||||||||||||| Sbjct 123 GGTAAAATTGCCGACAATGTTGGAACGTCGTATAAATGGACAATCCCAGAAGATTTCGCT 182 Query 19517 AACGATATACCAAATTCAACAAGTGGATGGGGCACTATATATGTAGACACTTACATTAAT 19576 ||||||||||||||||||||||||||| |||| |||||||||||||| ||||| |||||| Sbjct 183 AACGATATACCAAATTCAACAAGTGGACGGGGTACTATATATGTAGATACTTATATTAAT 242 Query 19577 GGAAGTTTCGTTCAAACACAGTCGACAACGTTCACGGCAAGTGTTATCGCAAATA 19631 |||| |||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 243 GGAAATTTCATTCAAACACAGTCGACAACGTTCACGGCAAGTGTTATCACAAATA 297 >seq123790 Length=336 Score = 318 bits (352), Expect = 1e-82 Identities = 219/246 (89%), Gaps = 1/246 (0%) Strand=Plus/Plus Query 34402 TATACAGAGCTTGGAATTCTAACGCCTCGAAAGGTAATCCAGTTAGAGGGTCTTCTGTCT 34461 |||||||| |||| | | |||| ||||| ||||||||||| |||||||||||||||||| Sbjct 16 TATACAGAAATTGGCAGTTTAACACCTCGCAAGGTAATCCAATTAGAGGGTCTTCTGTCT 75 Query 34462 AGAGAGCTATTCGGTAAGATAGCTAAGTACGTCTTTAATAAGTATGAGTGGCCAGAAAGC 34521 ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct 76 AGAGAGCTATTCGGTAAGATAGCGAAGTACGTCTTTAATAAGTATGAATGGCCAGAAAGC 135 Query 34522 CTAGATAAAGAGGTTGATAGAATCTATTTAGAATATCGCACAAAAGGTGAACTAGGCCGT 34581 |||||| |||| ||||||||||||||||||||||||||||| |||||| | ||||| ||| Sbjct 136 CTAGATGAAGA-GTTGATAGAATCTATTTAGAATATCGCACTAAAGGTAATCTAGGTCGT 194 Query 34582 GACAAAGAAAGTGTTAAACGTGCGTTATATAAAGCGATTTATATGGGCTTGTAGCGGTTC 34641 || ||||||||||||||||| | ||||||||||||| | ||||||||||| ||||| Sbjct 195 GATAAAGAAAGTGTTAAACGCACACTATATAAAGCGATGTCTATGGGCTTGTGAGGGTTC 254 Query 34642 GAATCC 34647 || ||| Sbjct 255 GACTCC 260 Score = 143 bits (158), Expect = 6e-30 Identities = 87/91 (96%), Gaps = 1/91 (1%) Strand=Plus/Plus Query 34795 GAGGGTTCGACTCCCTCGCTCGCTGTTAGTCTGTCATGACTAGGTAATTTTTTCGACACT 34854 ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||| Sbjct 247 GAGGGTTCGACTCCCTCGCTCGCTGTTAGTCTGTCGTGACTAGGAAATTTTTT-GACACT 305 Query 34855 TGTATCGCTGACAGACCGATACACAAACCCA 34885 |||||||||||||||||||||||||||||| Sbjct 306 CGTATCGCTGACAGACCGATACACAAACCCA 336 >seq115959 Length=416 Score = 86.0 bits (94), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 1/57 (2%) Strand=Plus/Minus Query 25858 TTAGAAAGGAACTAGATGAACGAAATAGCAACAAATGATTTTGACTACTCTTTGCTC 25914 |||||||||||| | ||||||||| |||||||||||||||||||||||||||||||| Sbjct 341 TTAGAAAGGAACAATATGAACGAA-TAGCAACAAATGATTTTGACTACTCTTTGCTC 286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113382689668200