Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_013600.1 Length=45169 Score E Sequences producing significant alignments: (Bits) Value seq31438 82.4 2e-11 >seq31438 Length=6810 Score = 82.4 bits (90), Expect = 2e-11 Identities = 141/198 (71%), Gaps = 10/198 (5%) Strand=Plus/Plus Query 16953 CGTGAGATCGGCGGCGCTATTATTTCCGCCGGAATCGTAACCGAGGACTTGAACGAATGA 17012 || || ||||| |||||||||||||| |||| ||| ||| |||| || | |||| Sbjct 4398 CGGGAAATCGGTGGCGCTATTATTTCAGCCGAAATTACAACGCAGGATTT---CTGATGA 4454 Query 17013 -CGATTATCTACGACGT--CACAGGCCATAAAGGCGGCGGCGGCAAAC--AGCACACCCC 17067 ||| || |||| | || | |||||||||| |||| | | | || || Sbjct 4455 GCGAAACCTTAAAACGTACCGCATCCACTAAAGGCGGCA-CGGCCAGCGTACGCCAGCCT 4513 Query 17068 ACAGGAGACGCCGGACAGCCTGCATTCGCTGGCTAAAATCCGCATCTTGCTCGCACTGGG 17127 |||| || |||||||||||||||| || |||||||| ||| ||| |||| || | || Sbjct 4514 ACAG-AGGCGCCGGACAGCCTGCACTCAGTGGCTAAAGCCCGTATCATGCTTGCTTTAGG 4572 Query 17128 CGAAGGTGAGTTCGAAGG 17145 |||||||||||| | ||| Sbjct 4573 CGAAGGTGAGTTTGCAGG 4590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144195738366600