Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_013696.1 Length=42822 Score E Sequences producing significant alignments: (Bits) Value seq39731 219 1e-52 >seq39731 Length=531 Score = 219 bits (242), Expect = 1e-52 Identities = 310/430 (72%), Gaps = 7/430 (2%) Strand=Plus/Minus Query 40901 TGAAAGTTGATTGGGCTACTCATGAAGCTACAAAGTATGCTTGCACGCACTTTCATTACA 40960 ||||||| | ||||||||| |||||||| |||||| || ||| | ||||||| |||| Sbjct 474 TGAAAGTAGCTTGGGCTACCTATGAAGCTGCAAAGTTCGCCTGCGAGAACTTTCACTACA 415 Query 40961 GCAAAAGTGTGCCTGTCGGAAAGCTCATTAAA-ATAGGAGCATGGGAAGATGGCCAATTT 41019 || || |||||| || || |||| || || || |||||||| ||||| || || Sbjct 414 GCCGTAGCCTGCCTGCTGGTAAA-TCATGGAAGATTGGTGCATGGGAGGATGGGCAGTTC 356 Query 41020 ATAGGAGTAGTAATTTTTAGTAGAGGTGCAAATAAGAGCATAGGAAGCCCATATGGATTG 41079 || || || ||||| || || | || |||||||| ||||||| |||||||| || Sbjct 355 ATCGGCGTTGTAATCTTCAGCCGCGGCGCAAATAACCGCATAGGCTCACCATATGGGCTG 296 Query 41080 GAACAAACAGAATGCTGTGAACTAACTAGGGTTGCTTTAACCAATCACAAGACGTTTGTA 41139 ||| | ||||| || || ||||| | ||||| | || || || | | |||||| Sbjct 295 ACACAGAAGGAATGTTGCGAGCTAACCCGTGTTGCCCTGACAAAGCATCAATCATTTGTA 236 Query 41140 TCTGAAATTTTGGCCAAAGCAATTAAGTTCCTAAAAGA--ATTTAATCCAAGCATGCAAT 41197 |||||||| |||| || || ||| | ||||| ||||| | | | || | | |||| | Sbjct 235 TCTGAAATCCTGGCAAAGGCGATTCACTTCCTTAAAGAGCAGTCA--CCGAACGTGCAGT 178 Query 41198 TAATAGTAAGCTATGCAGATACGGACCAAAACCATCATGGAGGTATCTATCAAGCAACAA 41257 | || || || ||| | ||| ||| || | |||||||| || ||||||||||| || | Sbjct 177 TGATCGTCAGTTATTCCGATCTGGAACAGGATCATCATGGCGGCATCTATCAAGCGACTA 118 Query 41258 ACTGGATATATACTGGAAAGACAGATGGGGAACGCTATTTCATTGTTAATGGAAAAAAGA 41317 ||||||||||| || |||||||| |||||||| || ||||| | |||| || | Sbjct 117 ACTGGATATATGAAGGTAAGACAGACGGGGAACGTTA-TTCATCTTGCATGGGAAGGGAA 59 Query 41318 CACATCCTAA 41327 ||||||||| Sbjct 58 TACATCCTAA 49 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136696959302400