Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq29103 120 3e-22 seq28556 105 8e-18 >seq29103 Length=1863 Score = 120 bits (132), Expect = 3e-22 Identities = 138/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||||||||| || |||||||| | |||||||| |||| || |||||||| ||||| || Sbjct 1098 CTCCTTTTGAATGTTGTAGTCTGCAAGAGTGCGGCCGTCCTCAAGCTGCTT-CCGGC-AA 1155 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | || | || |||||||||| |||||| ||||| | Sbjct 1156 GATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 1215 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||||| || || || || | |||||||| ||||||||||| || || || Sbjct 1216 GTCGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 1275 Query 46582 AAA 46584 || Sbjct 1276 GAA 1278 >seq28556 Length=388 Score = 105 bits (116), Expect = 8e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||||||||| || ||||| || || || || || | || || |||||||| |||||||| Sbjct 91 CTCCTTTTGAATGTTGTAATCAGAGAGGGTACGGCCATCTTCCAGCTGCTTTCCGGCGAA 150 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | || || |||||| ||||||| ||||| | Sbjct 151 GATGAGACGCTGCTGGTCCGGAGGAATGCCTTCTTTGTCCTGGATCTTCGACTTGACATT 210 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | || || || || || || | ||||||||| ||||| || || || || || Sbjct 211 GTCAATGGTATCCGAAGACTCTACTTCTAGCGTGATGGTCTTGCCGGTGAGGGTCTTGAC 270 Query 46582 AAAGATTTGCATT 46594 |||||||||||| Sbjct 271 GAAGATTTGCATT 283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564317767956000