Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_014036.1 Length=174436 Score E Sequences producing significant alignments: (Bits) Value seq33499 361 6e-95 seq31280 246 3e-60 seq38626 123 3e-23 seq62284 105 7e-18 seq40411 102 9e-17 >seq33499 Length=26748 Score = 361 bits (400), Expect = 6e-95 Identities = 575/822 (70%), Gaps = 2/822 (0%) Strand=Plus/Minus Query 77241 TTACGAGAATCGAAAATCACTTTACCAGCATAATCCGAACCCATTACAGTTTGAGGTACG 77300 ||||||| ||| | ||||| ||||| | || || ||| || || ||||| ||||| Sbjct 24093 TTACGAGCATCCATAATCAACTTACCTTCGTAGTCACCACCAATAACTGTTTGTGGTACA 24034 Query 77301 CCACCTTTATAGCGGGTAGAGTAGTTCATCTGTACATCCAGTTCTTTCCAGCGGATCATT 77360 ||||||| || || ||||| | || || |||| |||||| || ||||| Sbjct 24033 CCACCTTGGTATTTCTCAGCACGTTTCATTTCAACTTCGAGTTGTTTCCAACGAATCATC 23974 Query 77361 TCCGGTGTAATGGTGCGTTGCAGGGCGGCGTTGGCTTCTGCTTCTTTCTTCGCTGCATAC 77420 || || || || || |||| | ||| ||||| |||||||| | || ||||| Sbjct 23973 TCTGGAGTGATTGTTTTCTGCAACACACTGTTAGCTTCAGCTTCTTTTTGAGCAGCATAT 23914 Query 77421 AGACGGGCATCAGCATCACGTTCGTTAGCGATTGCAGCGTTTTCACGCGCCTGACGATCT 77480 | ||||| ||||| |||||||| || || | || | ||| || | ||||| Sbjct 23913 AATTTAGCATCTGCATCTCGTTCGTTTGCCTGGGCTTCATTATTACGGGCTTCTCGATCA 23854 Query 77481 GCTTCCGCTTGTTTTACTGCTTGTAGTGAAGTCTGTT-CTACTTTTTGCAGTTCAGCTTT 77539 || || || | || |||||||| ||| ||| | ||||| | ||| ||||| | Sbjct 23853 GCCTCTGCCTTCTTAACTGCTTGCTGTGTT-TCTTTAGCTACTCGGTCCAGATCAGCCTG 23795 Query 77540 AGCAGCGTTAACCTGTTCTTCGCGGATCTTCGTGTTAGTTACCTGTTCCATGATAACTTC 77599 || ||||||||||||||||| || ||||| || || |||||||| | |||||| || || Sbjct 23794 TGCTGCGTTAACCTGTTCTTCACGAATCTTTGTATTTGTTACCTGCTTCATGATTACATC 23735 Query 77600 CGGCAGGGTGATATCCTGCAAGAATACCTGTTTCACAGTGTAACCGTAAGGCCGCGCATA 77659 |||| ||||||||| |||||||| | | ||| ||||| ||||| ||||| || || || Sbjct 23734 AGGCAAGGTGATATCTTGCAAGAAGATTTCTTTTACAGTATAACCATAAGGACGTGCGTA 23675 Query 77660 ATCTTCTACTTCCTGCTGAATTGCAATTTGCAGTTGGTTTTGGATCTTCGCATCAAACAG 77719 |||| | ||| | | || | |||| || || |||| || | |||| Sbjct 23674 GGCTTCAATTTCAGCTTTTACTGAATCCTGCAACTGCGCCTGAATCTCAGCGTTGAACAA 23615 Query 77720 GTCTTGCGCTTTCGGTACGGATTTACCAAATTCGCGAACAGTGGAAAGTAGTTTTTCAGT 77779 || || |||||||| || ||||||||||| || || |||||||| | || |||| Sbjct 23614 ATCCTGTGCTTTCGGGACTGATTTACCAAACTCTCGGACAGTGGATAAAAGCTTTTGCTC 23555 Query 77780 TACATACTTATCCAGTGCCTGATCCTGATTACCCGCGTTGATACGGTTAATCGGTGCTTT 77839 ||||| |||||||| || || || ||| | || || || || ||||| || ||||| || Sbjct 23554 AACATATTTATCCAGAGCTTGCTCTTGAGTGCCTGCATTAATTCGGTTCATAGGTGCCTT 23495 Query 77840 GCTACCGTCGAATTGCAGCATTACGGTCATATCCACAGTGGATTTAAATTTATCCTGGGA 77899 ||| || || |||| ||| |||||||||||||| || |||||||| |||||||| Sbjct 23494 AGAACCATCAAACTGCAACATAACGGTCATATCCACTGTTGATTTAAACTTATCCTGACT 23435 Query 77900 TGGAACCTGTAATTTGTCGAACTTCATCGCGATGTCTTTGGTGCTGAACGTGTCGAACGT 77959 || || || ||||| || | | || ||| ||||| || ||||| || || || | Sbjct 23434 CGGTACTTGCAATTTATCATATGTTATTTTGATATCTTTTGTACTGAAAGTCTCAAAGCT 23375 Query 77960 TGCCAGCGGGTTTACAATGTGGAAACCAGGCAGTACGGGTTTCGGTGATACTTTACCCAT 78019 ||| | ||||| || | ||||| || ||| ||| || || || ||||||||||| Sbjct 23374 TGCAAATGGGTTAACCACATGGAACCCTGGCTTTACAGGATTAGGATTAACTTTACCCAT 23315 Query 78020 GAAGGTTTCAGTTTTAACCGTACCGTCTTGCACAATGGTATA 78061 ||||||| ||||| || ||||| |||||||| ||| |||| Sbjct 23314 AAAGGTTTGTGTTTTTACTGTACCATCTTGCACGATGATATA 23273 >seq31280 Length=10079 Score = 246 bits (272), Expect = 3e-60 Identities = 444/643 (69%), Gaps = 16/643 (2%) Strand=Plus/Minus Query 41085 AAACTGTCTCTACCGACTCCAATTATGGCGGGTGTACGTACTCCTACGCGCCAGTTCTCC 41144 ||| | || || ||||| ||||| ||| |||| || ||||| || || || |||||| | Sbjct 1751 AAAATCTCCCTGCCGACGCCAATCATGTCGGGAGTGCGTACGCCAACCCGTCAGTTCAGC 1692 Query 41145 AGTTGTGTAGTAATTGAATCGGGTGATTCTCTTGGTTCTCTTAACGCTGTAACCTCT--- 41201 ||||| | ||||||| || || || | ||| | ||||| ||||| Sbjct 1691 TCCTGTGTCCTGATTGAATGTGGCGACAGCCTGGATTCCATCAACGCG---ACCTCCAGC 1635 Query 41202 GCGATCGTGAAGTATATTTCACAACGTGCTGGTATTGGGGTTAACGCGGGACATATTCGC 41261 || || ||||| || |||||||||| || |||||||| |||||||||| | ||| ||| Sbjct 1634 GCTATTGTGAAATACGTTTCACAACGCGCAGGTATTGGTATTAACGCGGGTCGTATCCGC 1575 Query 41262 GCAATGGGTTCTAAAATCCGTGGTGGTGAAGCTGTTCATACTGGTGTGATTCCTTTCTGG 41321 || |||| || || || ||||||||| | ||||| ||| || || |||| Sbjct 1574 GCGCTGGGCAGCCCGATTCGCGGCGGTGAAGCTTTCCATACCGGTTGTATCCCGTTCTAC 1515 Query 41322 AAACATATCCAAACCGCTGTTAAATCCTGTTCACAGGGTGGCGTTCGTGGTGGTGCTGCA 41381 || || |||| || || || ||||||||||| ||||| ||||| ||||| || || || Sbjct 1514 AAGCACTTCCAGACAGCGGTGAAATCCTGTTCGCAGGGCGGCGTCCGTGGCGGCGCAGCG 1455 Query 41382 ACACTGTATTATCCTTTCTGGCATCTGGAAGTTGAAAACCTTCTGGTGTTGAAGAACAAC 41441 || |||| ||||| | |||||||||||||| |||| ||| | || |||| |||||| Sbjct 1454 ACGCTGTTCTATCCGATGTGGCATCTGGAAGTAGAAAGCCTGTTAGTCCTGAAAAACAAC 1395 Query 41442 AAAGGCGTAGAAGAAAACCGCGTTCGTCATCTTGATTACGGTGTACAGCTTAACCAGTTG 41501 || || |||| |||||||| ||||| | || |||||||| ||||| ||| | || Sbjct 1394 CGTGGTGTGGAAGGTAACCGCGTACGTCACATGGACTACGGTGTGCAGCTCAACAAAATG 1335 Query 41502 ATGTATAAACGCTTAATGAATCGTGATTACATTACGCTGTTTAGTCCGGATGTTGCTAAC 41561 ||||| | ||| | |||| | || |||| ||||||||||| ||| | | || | Sbjct 1334 ATGTACCAGCGCCTGCTGAAGGGCGAGGACATCACGCTGTTTAGCCCGTCAGACG-TACC 1276 Query 41562 GATCGTCTGTATGATCTGTTCTATGAAGCTGATCAGACTGCATTTGAAGAACTGT--ATG 41619 | | ||||| ||| ||||| | || |||||| | ||||||| || | | Sbjct 1275 --TGGCCTGTACGATGCGTTCTTT---GCCGATCAGGACGAATTTGAACGTCTTTACACC 1221 Query 41620 AAAGCCTGGAAAAAGACCCAACTGTTCGTAAGAAACGCATCAAAGCGGTTGACCTGTTCC 41679 ||| | ||| ||||| | |||||||| | || | |||||||| || |||||| Sbjct 1220 AAATAC--GAACAAGACAGCAGCATTCGTAAGCAGCGTGTGAAAGCGGTAGATCTGTTCT 1163 Query 41680 AACTTTTAGCACAGGAACGCGCACAGACAGGACGCAAATACAT 41722 || | ||||||||||| || || |||| ||||| Sbjct 1162 CGCTGATGATGCAGGAACGCGCCTCTACCGGCCGCATCTACAT 1120 >seq38626 Length=1471 Score = 123 bits (136), Expect = 3e-23 Identities = 471/730 (65%), Gaps = 17/730 (2%) Strand=Plus/Plus Query 153061 TCCCGACTAAACGCGATCTTCTGGCTGGTATCGTTTCTAAACATATGGCGCGTAACCATA 153120 ||||||| |||||||| | ||||| || || || | |||||| || | | || | Sbjct 668 TCCCGACCCAACGCGATTTGCTGGCCGGGATTGTGGCGAAACATTACGCCCAGCAGCAAA 727 Query 153121 TTCTACCGAAACATATTGTTGCGGCGCATGATTCCGGTGATATTCATTATCACGATCTGG 153180 | || || || | ||| ||||||||| ||| || || |||||||||||||| | Sbjct 728 TCCTGCCTCGTGATGTGGTTCAGGCGCATGAGCGCGGCGAGATCCATTATCACGATCTCG 787 Query 153181 ATTACAGCCCTTTCA-CCCCATACACTAACTGCTGTCTTGTTGACCTGAAAGGCATGTTA 153239 ||||| |||||| |||||| ||||||| || | || |||||||||||| | Sbjct 788 ATTACGCGCCTTTCTTCCCCATGTT-TAACTGCATGCTGATCGATCTGAAAGGCATGCTG 846 Query 153240 GAAAACGGGTTCCGTATGGGTAACGCTGATATCGAACCGCCTAAATCAATCGGTGTTGCT 153299 ||||| || ||||| ||||| || ||||| ||||| | || || | | || Sbjct 847 ACCAACGGTTTTAAAATGGGCAACGCGGAGATCGAGCCGCCCAGGTCGATTGCTACCGCC 906 Query 153300 ACTGCTCTTATGGCTCAGATCACCGCACAGATTGCTTCTCACCAGTACGGCGGGACAACC 153359 ||||| | | || || |||| || ||| |||| || || ||||| || || Sbjct 907 ACTGCGGTGACTGCGCAAATCATTGCCCAGGTTGCCAGCCATATCTATGGCGGAACCACG 966 Query 153360 TTTGCAAATGTCGATCAGGTGCTGGCCCCTTACGTTGAAATGACGTACAACAAACACTTT 153419 | | | || |||||||||| || || ||||| | | | | || | Sbjct 967 CTGAATCGTATTGACGAGGTGCTGGCACCCTATGTTGAGAAAAGTTTTGCCCGGCA---T 1023 Query 153420 AAAGATGCTGTTTGGTACGGGGTT--CCTAAATCAAAACAGTATGCGATGGAAAAAACAG 153477 ||||| | | | || ||| | || | | || ||||| | || | Sbjct 1024 AAAGAGGTAGCGCAGCACTGGGATATCCCCAGGCGGAAGCCTATGCCCGCCAGCGTACCG 1083 Query 153478 AAAAGGA-TG-TATTCGATGCGTTCCAGTCATACGAATATGAAGTAAACACCTTACATAC 153535 |||| || || ||| || || || ||||| |||||||| |||||||| | ||||| Sbjct 1084 AAAAAGAGTGCTAT--GACGCCTTTCAGTCGCTGGAATATGAGGTAAACACGCTGCATAC 1141 Query 153536 TGCAAATGGACAGACGCCTTTTGTCACGATCACTTTCGGTATGGGTACTGGTTGGCGCGA 153595 ||||| || ||||| || ||||||||| | ||||| |||| || | ||| || Sbjct 1142 GGCAAACGGCCAGACACCGTTTGTCACGTTTGGGTTCGGGTTGGGGACAAGCTGGGCCGC 1201 Query 153596 ACGCATGATCCAGAAAGCAATTCTGAAAAACCGTATTCGTGGACTGGGTAAAAAAGGCAT 153655 || || | |||| | | || || |||||| | |||||||||||||| ||| Sbjct 1202 CCGTCTGGTGCAGACATCCATCTTGCGTAACCGTCTGGCAGGACTGGGTAAAAATCGCAA 1261 Query 153656 TACTCCTGTATTCCCAAAACTGGTTATGTTT---ATGGAAAAAGGGATTAACCTTAATCC 153712 || | || ||||| || |||| ||||| || |||| |||||| | ||| Sbjct 1262 AACGGCCGTCTTCCCGAAGCTGG---TGTTTGCGATTCGGGAAGGCGTTAACCGTCGTCC 1318 Query 153713 GGAAGACAGAAACTATGATATTAAGAAATTGGCCCTGGAATGTTCTTCAAAGCGTATGTA 153772 || || |||||||| |||||| || |||| |||| ||| | || || ||||| Sbjct 1319 GGGCGATGTGAACTATGACATTAAGCAACTGGCGCTGGCCTGTGCCAGCAAACGAATGTA 1378 Query 153773 TCCGGATATT 153782 ||| |||||| Sbjct 1379 TCCCGATATT 1388 >seq62284 Length=976 Score = 105 bits (116), Expect = 7e-18 Identities = 298/447 (67%), Gaps = 12/447 (3%) Strand=Plus/Minus Query 41095 TACCGACTCCAATTATGGCGGGTGTACGTACTCCTACGCGCCAGTTCTCCAGTTGTGTAG 41154 |||| || || |||||||| ||| ||||||| ||| || || ||| |||||| | Sbjct 485 TACCAACACCTATTATGGCTGGTTTACGTACAAATACTCGTCAATTCAGTTCTTGTGTTG 426 Query 41155 TAATTGAATCG-GGTGATTCTCTTGGTTCTCTTAACGCTGTAACCTCTGCGATCGTGAAG 41213 |||| |||| || || || | | ||| |||| | ||||| ||| |||| Sbjct 425 TAAT-GAATGTAGGAGACAGCCTAGACAGTATTAGTGCTGGTAATTCTGCAATCATGAAA 367 Query 41214 TATATTTCACAACGTGCTGGTATTGGGGTTAACGCGGGACATATTCGCGCAATGGGTTCT 41273 |||||||| | ||||| | || || || || | |||| ||| | ||||| Sbjct 366 TATATTTCTAAGAAAGCTGGACTAGGTGTAAATTATGGTCGCGTTCGTGCAGTAGGTTCA 307 Query 41274 AAAATCCGTGGTGGTGAAGCTGTTCATACTGGTGTGATTCC-TTTCTGGAAACATATCCA 41332 |||| ||||||||||| || || || || || ||||||| |||||| || || Sbjct 306 GAAATTCGTGGTGGTGATGCAGTCCACACAGGCTTGATTCCATTTCTGTCGGCAGTGGCA 247 Query 41333 AACCGCTGTTAAATCCTGTTCACAGGGTGGCGTTCGTGGTGGTGCTGCAACACTGTATTA 41392 || ||||| |||||||||| |||||||| ||||| ||||| || ||||| | | | Sbjct 246 AA-AACTGTT-AATCCTGTTCTCAGGGTGGTGTTCGAGGTGGAGCAGCAACTGTACACTT 189 Query 41393 TCCTTTCTGGCATCTGGAAGTTGAAAACCTTCTGGTGTTGAAGAACAACAAAGGCGTAGA 41452 ||| | |||||| || ||||| | ||| | || |||| || || |||| ||| Sbjct 188 TCCACTATGGCATTACGAGTTTGAAGATCTTGTAGTACTGAA-AATAATAAAG--GTA-C 133 Query 41453 AGAAAAC---CGCGTTCGTCATCTTGATTACGGTGTACAGCTTAACCAGTTGATGTATAA 41509 ||||| | || || | || | ||||| || | ||| ||||| | ||||| | Sbjct 132 AGAAACCTCACGTGTAAGACAGTTAGATTATTGTTTTCAGATTAACAAAACTTTGTATCA 73 Query 41510 ACGCTTAATGAATCGTGATTACATTAC 41536 ||| ||||| | ||| | | ||||| Sbjct 72 ACGTTTAATTGAACGTAAGAATATTAC 46 >seq40411 Length=1793 Score = 102 bits (112), Expect = 9e-17 Identities = 214/314 (68%), Gaps = 4/314 (1%) Strand=Plus/Plus Query 154277 TCTACGCGCTGCGACCGAAGCATGGAAAAAGAAAACCGGATTTGGGTTTAGTCTGTACTC 154336 ||| ||||| |||||||| || |||||| | |||| || | ||| ||||| || ||| Sbjct 387 TCTGCGCGCGGCGACCGACGCCTGGAAAGCGGAAACGGGCTATGGCTTTAGCCTCTACAG 446 Query 154337 AAC-CCCTGCTGAATCTCTATGTCATCGTTTCTGCAAACTGGACTATGAGAAATTCGGAA 154395 || ||| || || || ||||| | ||||||||| |||||| | |||| || Sbjct 447 TACACCCAGCGAAAACT-TATGTGACCGTTTCTGCCGACTGGATGCGGCTGAATTTGGTG 505 Query 154396 GTATCAAAGGGATCACAGATAAAGGCTGGTACACTAACAGTTTTCATCTGGACGTTGACC 154455 | ||||| | || || ||||| | ||||| ||||| || |||||||||||||| Sbjct 506 TGGTAAAAGGCGTGACCGACAAAGGTTATTACACCAACAGCTTCCATCTGGACGTTGAGA 565 Query 154456 GCAAGGTAACACCGTTCGAGAAAATCGACTATGAAGCCGATTAT-CATTACATTGCAACT 154514 ||||| | || | ||| |||||||| | |||||| ||| | || | ||| | Sbjct 566 AGAAGGTGAATCCTTACGAAAAAATCGATTTTGAAGCTCCCTATCCGCCACTCTCCAA-T 624 Query 154515 GCTGGACATATCAGCTATGTAGAATTCCCTGATATGAAAAACAACCTGGAAGCCCTTGAA 154574 | || |||| | || | |||| || || || | ||||||| | || || ||| Sbjct 625 GGCGGTTTTATCTGTTACGGCGAATATCCCAATGTGCAGCACAACCTTAAGGCGCTGGAA 684 Query 154575 AAAGTCTGGGATTA 154588 | ||||||||||| Sbjct 685 GACGTCTGGGATTA 698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557158248048000