Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_014595.1 Length=170605 Score E Sequences producing significant alignments: (Bits) Value seq31280 134 2e-26 seq49234 104 3e-17 >seq31280 Length=10079 Score = 134 bits (148), Expect = 2e-26 Identities = 183/253 (72%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 142879 CGGACTAAACAGAGTGATGTAATCATTCTTAGCCAGACGTTCCATCATCAGGTTATTCAG 142938 ||| |||||||| ||||||| || ||| ||| || | ||||| || || || Sbjct 1287 CGGGCTAAACAGCGTGATGTCCTCGCCCTTCAGCAGGCGCTGGTACATCATTTTGTTGAG 1346 Query 142939 CTGGACACCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCCCTTGTTGTTCTTCAG 142998 ||| ||||| |||||||| || | | |||||| |||| || || |||||| ||||| Sbjct 1347 CTGCACACCGTAGTCCATGTGACGTACGCGGTTACCTTCCACACCACGGTTGTTTTTCAG 1406 Query 142999 AACGAGTAAATTTTCAACTTCCAAATGCCAAATAGGATAATA-AGCAGTAGCAGCGCCGC 143057 || | | |||| ||||||| |||||| || ||||| | ||| || || ||||||| Sbjct 1407 GACTAACAGGCTTTCTACTTCCAGATGCCACATCGGATAGAACAGC-GTCGCTGCGCCGC 1465 Query 143058 CACGGATTCCACCTTGTGAACATGATTTAACAGCCGTTTGGAAATGTTTCCAGAACGGAA 143117 |||||| || || || ||||| ||||| || || || ||||| || || ||||||| | Sbjct 1466 CACGGACGCCGCCCTGCGAACAGGATTTCACCGCTGTCTGGAAGTGCTTGTAGAACGGGA 1525 Query 143118 TAACACCAGTATG 143130 || ||| ||||| Sbjct 1526 TACAACCGGTATG 1538 >seq49234 Length=879 Score = 104 bits (114), Expect = 3e-17 Identities = 120/159 (75%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 58955 TTTATCATAAAAGAAGGTGACATGACCAGTCCCTAGAAGAAAAGATGATGGGATTTTAAA 59014 ||||| ||| || || || |||||||| || |||| | | | | | | |||||||| Sbjct 363 TTTATTATAGAA-AATGTAACATGACCTGTACCTAAATGTAGGTAGTACTG-ATTTTAAA 420 Query 59015 GTCAGAAACCTTTTTACCATTTTGTACATGCTTACGAACAGCACCAAAAACGCGAGGAAG 59074 ||| | ||||||| |||||| ||||||||||||||||| || || || || | Sbjct 421 ATCATTGATTCGTTTACCAGCTTGTACGTGCTTACGAACAGCACCGAATACACGTGGCAA 480 Query 59075 CTCACGATATTCAGCCATAAGATGTTGGTCAGCAAGTTC 59113 ||||| |||||||||||||||||||||||||| | ||| Sbjct 481 TTCACGGTATTCAGCCATAAGATGTTGGTCAGCTAATTC 519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544919015220000