Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_014635.1 Length=163875 Score E Sequences producing significant alignments: (Bits) Value seq33499 159 4e-34 >seq33499 Length=26748 Score = 159 bits (176), Expect = 4e-34 Identities = 257/363 (71%), Gaps = 6/363 (2%) Strand=Plus/Plus Query 117232 TGGTTATGAGGTAACCGAAGTGTTCCTGCAAGAGATTACTCTGCCGAAGCTGATTCAAGA 117291 ||||||| |||| ||| | ||| ||||||| || || |||| | | || || || Sbjct 23689 TGGTTATACTGTAAAAGAAATCTTCTTGCAAGATATCACCTTGCCTGATGTAAT-CATGA 23747 Query 117292 C-CAGGTTGAGCAAAC-CAAA-ATTCGTGAAGAAGCCGTAAACCAAGCCCAAGCGGATCT 117348 ||||| | |||| |||| |||||||||||| || ||| ||| || || ||||| Sbjct 23748 AGCAGGT--AACAAATACAAAGATTCGTGAAGAACAGGTTAACGCAGCACAGGCTGATCT 23805 Query 117349 GGATAAAGCCGAAAAAGTGGCACAACAACAGGTTAAGACCGCCGAAGCTGCGCGTGAAGC 117408 ||| || | |||| |||| ||| ||||||| || || |||| || ||||| Sbjct 23806 GGACCGAGTAGCTAAAGAAACACAGCAAGCAGTTAAGAAGGCAGAGGCTGATCGAGAAGC 23865 Query 117409 TCGTGAACAAAACGCGGTTGCTAACGAGCGTGATGCTGATGCTAAACTGTACGCCGCTGG 117468 ||| | | | || || ||||| || ||||| ||||||||| | || || ||| Sbjct 23866 CCGTAATAATGAAGCCCAGGCAAACGAACGAGATGCAGATGCTAAATTATATGCTGCTCA 23925 Query 117469 TAAAGAAGCTGAAGCTAACGCTCTGCTGCAGAAAACCATTACTCCTGAAATGATCAAATG 117528 |||||||||||||||||| | || |||||||||| || ||||| || ||||| || Sbjct 23926 AAAAGAAGCTGAAGCTAACAGTGTGTTGCAGAAAACAATCACTCCAGAGATGATTCGTTG 23985 Query 117529 GCGCCAGCTGGAAGTCGAAATGATTCGTGCCAACAAATATCAAGGTGGTGTACCGCAGAC 117588 | || || ||||| ||||||| ||||| | ||||| |||||||||||||| || || Sbjct 23986 GAAACAACTCGAAGTTGAAATGAAACGTGCTGAGAAATACCAAGGTGGTGTACCACAAAC 24045 Query 117589 TGT 117591 || Sbjct 24046 AGT 24048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 523418091980000