Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_014792.1 Length=169285 Score E Sequences producing significant alignments: (Bits) Value seq31280 138 1e-27 seq49234 102 9e-17 >seq31280 Length=10079 Score = 138 bits (152), Expect = 1e-27 Identities = 310/460 (67%), Gaps = 12/460 (3%) Strand=Plus/Plus Query 141303 GGACTAAACAGAGTGATGTAATCATTCTTAGCCAGTCGTTCCATCATCAGGTTATTCAAC 141362 || |||||||| ||||||| || ||| ||| || | ||||| || || | | Sbjct 1288 GGGCTAAACAGCGTGATGTCCTCGCCCTTCAGCAGGCGCTGGTACATCATTTTGTTGAGC 1347 Query 141363 TGAACACCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCCCTTGTTGTTCTTCAGA 141422 || ||||| |||||||| || | | |||||| |||| || || |||||| ||||| Sbjct 1348 TGCACACCGTAGTCCATGTGACGTACGCGGTTACCTTCCACACCACGGTTGTTTTTCAGG 1407 Query 141423 ACGAGTAAATTTTCAACTTCCAAATGCCATAAAGGATAATA-AGCAGTAGCAGCGCCGCC 141481 || | | |||| ||||||| |||||| | ||||| | ||| || || |||||||| Sbjct 1408 ACTAACAGGCTTTCTACTTCCAGATGCCACATCGGATAGAACAGC-GTCGCTGCGCCGCC 1466 Query 141482 ACGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAATGTTTCCAGAACGGAAT 141541 ||||| || || || ||||||||||| || || || ||||| || || ||||||| || Sbjct 1467 ACGGACGCCGCCCTGCGAACAGGATTTCACCGCTGTCTGGAAGTGCTTGTAGAACGGGAT 1526 Query 141542 AACACCAGTATGCTTGACTTCACCCATACCGATTTTCG---AACCTTCAGCACGAATCAT 141598 | ||| ||||| ||||||| ||| ||| || || || || Sbjct 1527 ACAACCGGTATGGAAAGCTTCACC---GCCGCGAATCGGGCTGCCCAGCGCGCGGATACG 1583 Query 141599 GCCAACGTTGATACCGATACCCGCCCGCTTACTGATA--TATTCGATGATTGAATTGGCG 141656 || |||| ||||| ||||| | ||| | ||| | |||| | || | ||| | Sbjct 1584 ACCCGCGTTAATACCAATACCTG--CGCGTTGTGAAACGTATTTCACAATAGCGCTGGAG 1641 Query 141657 GTCTTATTGATTGACTTCAGGGAGTCAGCAGCTTCGATAACCACACAGGAACTGAACTGC 141716 ||| ||||| || | |||| ||| || ||| || | |||||||| |||||||| Sbjct 1642 GTCGCGTTGATGGAATCCAGGCTGTCGCCACATTCAATCAGGACACAGGAGCTGAACTGA 1701 Query 141717 CGGGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTGGGCA 141756 ||||| || || | | |||| |||||| || || |||| Sbjct 1702 CGGGTTGGCGTACGCACTCCCGACATGATTGGCGTCGGCA 1741 >seq49234 Length=879 Score = 102 bits (112), Expect = 9e-17 Identities = 119/158 (75%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 57926 TTATCATAAAAGAAGGTGACATGACCAGTCCCTAAAAGAAAAGATGATGGGATTTTAAAG 57985 |||| ||| || || || |||||||| || |||||| | | | | | |||||||| Sbjct 364 TTATTATAGAA-AATGTAACATGACCTGTACCTAAATGTAGGTAGTACTG-ATTTTAAAA 421 Query 57986 TCAGACACCTTTTTACCATTTTGCACATGCTTACGAACAGCACCAAACACGCGAGGAAGC 58045 ||| | ||||||| ||| || ||||||||||||||||| || || || || | Sbjct 422 TCATTGATTCGTTTACCAGCTTGTACGTGCTTACGAACAGCACCGAATACACGTGGCAAT 481 Query 58046 TCACGGTATTCAGCCATAAGGTGTTGGTCAGCAAGTTC 58083 |||||||||||||||||||| ||||||||||| | ||| Sbjct 482 TCACGGTATTCAGCCATAAGATGTTGGTCAGCTAATTC 519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540701895060000