Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_015250.1 Length=159801 Score E Sequences producing significant alignments: (Bits) Value seq46093 91.5 2e-13 seq2157 86.0 6e-12 seq51525 84.2 2e-11 seq59449 82.4 8e-11 >seq46093 Length=666 Score = 91.5 bits (100), Expect = 2e-13 Identities = 67/77 (87%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 69740 TGGTGGGCCCAGCAGGACTCGAACCTGAAACCAACGGATTATGAGTCCGCTGCTCTGCCA 69799 |||||| |||| ||||| ||||||||| |||||| ||||||||||||| ||||||| | Sbjct 574 TGGTGG-CCCACCAGGATTCGAACCTGGAACCAAAGGATTATGAGTCCTCTGCTCTAACC 632 Query 69800 ATTGAGCTATAGGCCCT 69816 |||||||||||||||| Sbjct 633 GTTGAGCTATAGGCCCT 649 >seq2157 Length=10186 Score = 86.0 bits (94), Expect = 6e-12 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 69736 AATCTGGTGGGCCCAGCAGGACTCGAACCTGAAACCAACGGATTATGAGTCCGCTGCTCT 69795 || |||||||||||| ||||||||||| ||||| ||||||||||||| ||||||| Sbjct 9518 AAGCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCT 9577 Query 69796 -GCCAATTGAGCTATAGGCCCT 69816 |||| ||||||||||||||| Sbjct 9578 AACCAACTGAGCTATAGGCCCT 9599 >seq51525 Length=844 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 69654 TTTGGAGCGGTTGACGAGATTCGAACTCGCGACATCTGACTTGGAAGGACAGCACTCTAC 69713 ||||||||| | | |||||| |||||| ||||||| ||||||||||||| || |||||| Sbjct 454 TTTGGAGCGAGTAATGAGATTTGAACTCACGACATCCGACTTGGAAGGACGGCGCTCTAC 513 Query 69714 CATCTGAGTTACAACCGCA 69732 || ||||| |||| |||| Sbjct 514 CAACTGAGCTACACTCGCA 532 >seq59449 Length=627 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/82 (83%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 69736 AATCTGGTGGGCCCAGCAGGACTCGAACCTGAAACCAACGGATTATGAGTCCGCTGCTCT 69795 || |||||||||||| ||||||||||| ||||| ||||||||||||| ||||||| Sbjct 93 AAGCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCT 34 Query 69796 -GCCAATTGAGCTATAGGCCCT 69816 || | ||||||||||||||| Sbjct 33 AACCGACTGAGCTATAGGCCCT 12 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510402525668000