Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_015274.1 Length=56506 Score E Sequences producing significant alignments: (Bits) Value seq125025 82.4 3e-11 >seq125025 Length=589 Score = 82.4 bits (90), Expect = 3e-11 Identities = 177/257 (69%), Gaps = 11/257 (4%) Strand=Plus/Minus Query 40138 GAAGTTCGTCGACAGTTACATGAGCTCTTCTAATGAAGGTCTAATTATCGGTAAGA--AC 40195 ||| || |||| || |||||| | || ||||||||||| |||| ||||| | | Sbjct 470 GAATTTTATCGATAGCTACATGGCAGCATCAAATGAAGGTCTTGTTATTGGTAAAAAGAT 411 Query 40196 GACGGTAGCTCTACCA--TTAAGGTAT-CAAGTGACCGAATTTCTATGTTCTCCGCAGGG 40252 || ||||||| || || | || ||| | || || || ||| |||| || ||| Sbjct 410 GAATCAAGCTCTATCATGTTCA---ATCCAAACGGGCGTATCTCAATG-TCTCAGCTGGG 355 Query 40253 AATGAAGTT-ATGTAC-CTTACGCAAGGGTTCATTCACATCGATAACGGGATCTTTACCC 40310 || || ||| |||||| || | |||| |||| || ||||| ||||| || || | Sbjct 354 AACGAGGTTAATGTACAATTTCAAAAGGTATCATCCATATCGAAAACGGTATTTTCTCTA 295 Query 40311 AATCCATTCAAGTCGGCCGATTTAGAACGGAACAATACTCGTTTAATCCAGACATGAACG 40370 |||| || ||| |||| |||| | || ||||||| | | || ||||||||| || | Sbjct 294 AATCTATCCAAATCGGACGATATCGAGAGGAACAAGATTTATTGAATCCAGACCGTAATG 235 Query 40371 TGATTCGGTATGTAGGA 40387 | ||| | || |||||| Sbjct 234 TCATTAGATACGTAGGA 218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180418004344800