Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq45636 93.3 5e-14 seq33148 91.5 2e-13 seq83917 89.7 6e-13 seq62862 87.8 2e-12 >seq45636 Length=1761 Score = 93.3 bits (102), Expect = 5e-14 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 140961 TAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTAGGTTCGAGTCCTACC 141020 ||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||| | Sbjct 106 TAGCTCAACTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCGCAGGTTCGAGTCCTGCA 47 Query 141021 TGGGTCGCC 141029 |||||||| Sbjct 46 GGGGTCGCC 38 >seq33148 Length=515 Score = 91.5 bits (100), Expect = 2e-13 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 140960 GTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTAGGTTCGAGTCCTAC 141019 ||||||||| ||||||||||| | ||||||||||| | ||||||||||||||| ||||| Sbjct 215 GTAGCTCAGCTGGATAGAGCAGCCGCCTTCTAAGCGGCAGGTCGTAGGTTCGAGCCCTAC 274 Query 141020 CTGGGTCGCC 141029 | |||||||| Sbjct 275 CGGGGTCGCC 284 >seq83917 Length=859 Score = 89.7 bits (98), Expect = 6e-13 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 141678 GGAAGAGTGGTCGAGTGGTTTATGGCACTGGTCTTGAAAACCAGCGAGGGTGCAAGTTCT 141737 ||||| |||| ||||||||| | |||||| ||||||||||| ||||| || | || | | Sbjct 83 GGAAGCGTGGCCGAGTGGTTGAAGGCACTAGTCTTGAAAACTAGCGACGGGGTAACTCGT 142 Query 141738 CCGTGGGTTCAAATCCCACCTCTTCCG 141764 ||||||||| ||||||||| |||||| Sbjct 143 TCGTGGGTTCGAATCCCACCGCTTCCG 169 >seq62862 Length=1236 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||| | |||||||||||||| ||| Sbjct 478 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 537 Query 141314 CCTACCTGGGGAG 141326 ||||| ||||||| Sbjct 538 CCTACTTGGGGAG 550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 609402616212000