Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq32476 93.3 5e-14 seq54003 91.5 2e-13 seq62284 87.8 2e-12 >seq32476 Length=4790 Score = 93.3 bits (102), Expect = 5e-14 Identities = 182/269 (68%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 154861 AACTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTA 154920 |||||||||| || ||| | || |||||||| || || || || | ||| | ||| Sbjct 1320 AACTGTCATGCATCATGGTGACCTACCCATCCACGCACGGCGTGTACGAAGAGACTATTC 1261 Query 154921 GACAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATC 154980 | | | || ||||||| ||| | |||| || |||||||| || || || || || Sbjct 1260 GTGAAGTGTGCCAGATCGTGCATCAGTATGGCGGCCAGGTATACCTGGACGGTGCGAACA 1201 Query 154981 TAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAA 155040 | ||||| ||||| || | | | || || | ||| || || || | || || | Sbjct 1200 TGAATGCCCAGGTGGGCATTACGACGCCGGGTTATATTGGCGCTGACGTTTCGCACCTTA 1141 Query 155041 ACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAG 155100 || | || ||||| ||||||||||| || || || || || || ||| | || ||||| | Sbjct 1140 ACCTGCACAAAACTTTCTGTATTCCGCACGGCGGCGGCGGCCCGGGCATGGGACCTATTG 1081 Query 155101 GTGTAGCAAAACATCTCACACCATTTGTA 155129 | || | ||||| |||| |||||| Sbjct 1080 GCGTGAAAGCGCATCTGGCACCGTTTGTA 1052 >seq54003 Length=556 Score = 91.5 bits (100), Expect = 2e-13 Identities = 163/236 (69%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 153794 TGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGG 153853 ||| || || ||||| || |||||||| || ||||| ||| | ||| | ||||| Sbjct 552 TGGCGGGCCGCATGCCGCCTTCTTTGCTTGTGACGAAAAGTACAAGCGCAAGCTTCCTGG 493 Query 153854 CAGAATTGTAGGTCAGTC--AGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTA 153911 | | || || ||| || | | | || |||||| || ||| || || ||| Sbjct 492 TCGGTTGGTTGGCTTGTCCAAGGACAGACTG--GGTAATCCGGCCGCCAGGTTGGCCCTA 435 Query 153912 CAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAG 153971 ||||| || ||||||||||| || | || || || || || |||||||||||||| ||| Sbjct 434 CAGACGAGGGAGCAGCATATTCGGCGCGAGAAGGCGACAAGCAACATCTGCACAGCGCAG 375 Query 153972 GCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGGTGCAGATGGACT 154027 || || || || |||||| || | |||||| |||||||| | ||||||| Sbjct 374 GCGCTACTAGCGAATATGAGTGCCATGTATGCAATTTATCATGGCCCGAATGGACT 319 >seq62284 Length=976 Score = 87.8 bits (96), Expect = 2e-12 Identities = 212/311 (68%), Gaps = 14/311 (5%) Strand=Plus/Minus Query 149790 AAATTCGTGGTGGAGA---AGTCCAACACACAGGCGTTATACCTTTCCTCAAAAAGTTTG 149846 ||||||||||||| || |||| ||||||||| | || || || || | | Sbjct 305 AAATTCGTGGTGGTGATGCAGTC---CACACAGGCTTGATTCCATTTCTGTCGGCAGTGG 249 Query 149847 AAAGCACTGTCAGATGCTGCACTCAGAATGGCATTAGAGGTGGATCAGCAACTGTCCACT 149906 || ||||| | || ||| ||||| ||| || |||||||| |||||||||| |||| Sbjct 248 CAAAAACTGTTA-ATCCTGTTCTCAGGGTGGTGTTCGAGGTGGAGCAGCAACTGTACACT 190 Query 149907 TCCCCATCTGGCACCAAGAGATAGAAGATATATTAGTTCTAAAGAACAACAAAGGAACTG 149966 | || | ||||| | ||| | |||||| | |||| || || || || ||||| || | Sbjct 189 TTCCACTATGGCATTACGAGTTTGAAGATCTTGTAGTACTGAA-AATAATAAAGGTACAG 131 Query 149967 AAGACAATAGAGTAAGGAAACTAGACTATAGTATTCAGA-TCTCAAAACTATTCTATGCA 150025 || | | ||||| | |||| ||| || |||||| | ||||||| || ||| || Sbjct 130 AAACCTCACGTGTAAGACAGTTAGATTATTGTTTTCAGATTAACAAAACT-TTGTAT-CA 73 Query 150026 AGGTTCATGCAGAAC--AAAGACATCAGTTTGTTCTCTCCACATGACGTGCCTAGATTAT 150083 | ||| | |||| || | || | || || || ||| ||| || ||| || ||| Sbjct 72 ACGTTTA-ATTGAACGTAAGAATATTACATTCTTTTCACCAAGTGATGTTCCTGGACTAT 14 Query 150084 ATGATGCATTT 150094 |||| |||||| Sbjct 13 ATGAAGCATTT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578269407152000