Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_015282.1 Length=174079 Score E Sequences producing significant alignments: (Bits) Value seq41062 116 4e-21 >seq41062 Length=2478 Score = 116 bits (128), Expect = 4e-21 Identities = 206/295 (70%), Gaps = 4/295 (1%) Strand=Plus/Plus Query 157199 GTTATTTCTGGAGACCAGAAGAAGTTTCCTTACAAAAAGACCGTAGTGATTACCAAACTT 157258 ||| ||||||| | ||| |||||||| ||| ||||||||||| ||||| || | Sbjct 381 GTTTTTTCTGGCGTCCACAAGAAGTTGATTTATCAAAAGACCGTATTGATTTTAAATCAC 440 Query 157259 TATCGGATGAGCAGAAGCACATCTTCACCAGCAATCTTAAATACCAGATCATGCTGGATT 157318 || |||| | ||||||| || ||||| ||| | ||| || || | || |||| Sbjct 441 TACAGGATCATGAGAAGCATATTTTCACTTCTAATTTGAAACGTCAAATTCTTCTTGATT 500 Query 157319 CTGTCCAAGGGCGTGGTCCTGGGATGGCTTTTATCCCATACTG-TTCATTACCTGAGCTT 157377 | || ||||| ||||| || | || | | ||| | || |||||||||||| || Sbjct 501 CAGTTCAAGGTCGTGGACCAAACCTAGCACTATTACCA-ATTGCTTCATTACCTGAAATT 559 Query 157378 GAAGCTTGTA-TGACTGTATGGGAGTTTATGGAAATGGTCCATAGTCGCTCCTACACATA 157436 ||| ||| | ||| | |||| ||| | |||| || ||||| || ||||| ||| | Sbjct 560 GAATCTTTCATTGAAACT-TGGGCATTTTTTGAAAGCGTTCATAGCCGTTCCTATACACA 618 Query 157437 CATCATTAAGAACGTGTATTCAGATCCCTCTGAGGTATTTGATACTATCTTGGAT 157491 || ||| ||||||||| | |||| || || |||||||||||||| || ||| Sbjct 619 TATTATTCGTAACGTGTATCCGAATCCATCGGAAGTATTTGATACTATGTTAGAT 673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556017708732000