Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq32476 89.7 6e-13 seq117426 84.2 3e-11 >seq32476 Length=4790 Score = 89.7 bits (98), Expect = 6e-13 Identities = 181/269 (67%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 159536 AACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCA 159595 |||||||||| || ||| | || || ||||| || || || || | ||| | || Sbjct 1320 AACTGTCATGCATCATGGTGACCTACCCATCCACGCACGGCGTGTACGAAGAGACTATTC 1261 Query 159596 GACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATC 159655 | | | || |||| || ||| || |||| || |||||||| || || ||||| || Sbjct 1260 GTGAAGTGTGCCAGATCGTGCATCAGTATGGCGGCCAGGTATACCTGGACGGTGCGAACA 1201 Query 159656 TAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAA 159715 | ||||| ||||| || | | | || || | ||| || || || | || || | Sbjct 1200 TGAATGCCCAGGTGGGCATTACGACGCCGGGTTATATTGGCGCTGACGTTTCGCACCTTA 1141 Query 159716 ACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTG 159775 || | || || || ||||||||||| || || || || || || ||| | || ||||||| Sbjct 1140 ACCTGCACAAAACTTTCTGTATTCCGCACGGCGGCGGCGGCCCGGGCATGGGACCTATTG 1081 Query 159776 GTGTAGCAAAACATCTCACACCATTTGTA 159804 | || | ||||| |||| |||||| Sbjct 1080 GCGTGAAAGCGCATCTGGCACCGTTTGTA 1052 >seq117426 Length=324 Score = 84.2 bits (92), Expect = 3e-11 Identities = 134/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 157915 CCAGTCATACAGCGAAACGTTCTTGAGAATCCTAGTTGG-TACACATCTTACACTCCCTA 157973 || || || ||||| ||| ||||||||||||| ||||| ||||| ||||| ||||| Sbjct 317 CCGGTGATTCAGCGCAACATTCTTGAGAATCCGGGTTGGCTACACTCAATACACGCCCTA 258 Query 157974 TCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCAC 158033 || |||| || |||| || ||| | ||||| || |||| | ||||||| | | | Sbjct 257 CCAGCCTGA-ATCGCTCAAGGCAGACTCGAAGCATTGCTCAACTTCCAAACGATGGTGAT 199 Query 158034 AGAACTCACAGGACTACCGATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGC 158093 || || || | | | ||| || || || || | | || |||| ||| || ||||| Sbjct 198 GGAGCTGACCGCAATGGAGATTGCCAATGCCTCGTTGCTCGACGAAGGAACAGCCGCAGC 139 Query 158094 AGAAGCAATG 158103 |||||| ||| Sbjct 138 AGAAGCCATG 129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587093411608000