Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_015296.1 Length=157061 Score E Sequences producing significant alignments: (Bits) Value seq66454 95.1 1e-14 seq34332 86.0 6e-12 >seq66454 Length=1623 Score = 95.1 bits (104), Expect = 1e-14 Identities = 72/84 (86%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 137228 TTTGGCCCCGTAGCTCAGT-GGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTC 137286 ||||| ||| ||||||||| ||||||||||| | ||||||||| | | |||||||||||| Sbjct 1293 TTTGGTCCCTTAGCTCAGTTGGTTAGAGCAGGCAACTCATAATTGCTCGGTCGCTGGTTC 1234 Query 137287 AAGTCCAGCCAGGGTCACCAAATA 137310 |||||||| || |||||||||| Sbjct 1233 GAGTCCAGCAGGGATCACCAAATA 1210 >seq34332 Length=487 Score = 86.0 bits (94), Expect = 6e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 137631 TGTAGTTCAGTCGGTAGAACGGTGGACTGTTAATCCATATGTCGCAGGTTCAAGTCCTGC 137690 |||||||||||||||||||||| ||||||||||||| |||||| | ||||| ||||| | Sbjct 354 TGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGT 295 Query 137691 CATCGTCGCCAAATTGA 137707 || | |||| ||||| Sbjct 294 CAGAGGAGCCAGATTGA 278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 501648806548000