Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_016566.1 Length=44077 Score E Sequences producing significant alignments: (Bits) Value seq31438 104 7e-18 >seq31438 Length=6810 Score = 104 bits (114), Expect = 7e-18 Identities = 149/200 (75%), Gaps = 14/200 (7%) Strand=Plus/Plus Query 17802 CGTGAGATCGGCGGCGCTATTATTTCAGCCGGAATTGTAACCGAGGATTTTAACGAATGA 17861 || || ||||| ||||||||||||||||||| |||| ||| ||||||| | |||| Sbjct 4398 CGGGAAATCGGTGGCGCTATTATTTCAGCCGAAATTACAACGCAGGATTT---CTGATGA 4454 Query 17862 -CGATTATCTACGACGTCACGGG-CCA-TAAAGGCGGC--GGC--GCAAAACCGCACACC 17914 ||| || |||| || ||| |||||||||| ||| || | ||| || | Sbjct 4455 GCGAAACCTTAAAACGTACCGCATCCACTAAAGGCGGCACGGCCAGCGTA--CGC-CAGC 4511 Query 17915 CCACAGGAGACGCCTGACAGCCTGCATTCACTGGCTAAAGCCCGCATCTTGCTAGCACTG 17974 | |||| || |||| ||||||||||| ||| ||||||||||||| ||| |||| || | Sbjct 4512 CTACAG-AGGCGCCGGACAGCCTGCACTCAGTGGCTAAAGCCCGTATCATGCTTGCTTTA 4570 Query 17975 GGTGAAGGTGAGTTTGAAGG 17994 || ||||||||||||| ||| Sbjct 4571 GGCGAAGGTGAGTTTGCAGG 4590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140706745295400