Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_016763.1 Length=43221 Score E Sequences producing significant alignments: (Bits) Value seq38760 116 1e-21 seq38219 87.8 5e-13 >seq38760 Length=2427 Score = 116 bits (128), Expect = 1e-21 Identities = 117/147 (80%), Gaps = 4/147 (3%) Strand=Plus/Minus Query 32120 GAAACGAAAAAACCGCCTCCCCAGGCGGTTTTTTCGAGGGTTCAGTAAGTTGGGGAACTT 32179 ||||||||||| |||||| | |||||||||| ||| ||||||| |||||||||||||| Sbjct 1447 GAAACGAAAAA-CCGCCTTGCAGGGCGGTTTTT-CGAAGGTTCAGAAAGTTGGGGAACTT 1390 Query 32180 -CTGAACCGTGGTAACAGGGTGTACAAGACCGCTGAAACCAAATTCTGTCCTTTCAGTTT 32238 ||||||| ||| || || | || || ||| | |||| |||| |||||||||||| | Sbjct 1389 ACTGAACCACGGTGACTGGCTTTAACGGAGCGCAGTAACCTAATT-TGTCCTTTCAGTGT 1331 Query 32239 AGCCGTAGTTGGGCTGAGACTTCAAGA 32265 ||||| ||| |||| ||||||||| Sbjct 1330 AGCCGCAGTCAGGCTCCTACTTCAAGA 1304 >seq38219 Length=2761 Score = 87.8 bits (96), Expect = 5e-13 Identities = 184/261 (70%), Gaps = 10/261 (4%) Strand=Plus/Plus Query 25354 CTATCGGTTACGGCGAAGGCAATCCTGA-GATGCCGCTGGAATACGAGCGCGAAGCGTCC 25412 |||||||||| | ||||| | ||| |||| ||||||| || || ||| | || Sbjct 1 CTATCGGTTATGCCGAAGAGCAGGATGAAGATGATA-TGGAATATGATCGTGAACCTGCC 59 Query 25413 CGCGGCAACGGCGGCGGTGTTGAAACCCTGTGGACGCGT-AAAACGTGGTTGCTGCATCC 25471 || || ||||| || |||| ||||| |||||||||||| ||| | ||| |||||||| Sbjct 60 CGTGGTAACGGTGGTGGTGCAGAAACGCTGTGGACGCGTCGTAACTTCGTT-CTGCATCC 118 Query 25472 GTTTGGTTACAGCTTCACCAGCGCTGTAATCACCGGCAACGGCACCGAGACTATCG-CCC 25530 | | || || ||||| |||| || ||||||||| ||| || | || ||| || Sbjct 119 GCTGGGCTATTCCTTCAACAGCACTACCATCACCGGC-ACGCCA-GGCACCTCTCGTCCT 176 Query 25531 GT-TCCGCTAGCTGGCAGGACCTGGCTAACGCTACCAACTGGAACCGTGTAGTTGA-CCG 25588 || || |||| |||| |||||||| || || |||||| |||| |||| | ||| Sbjct 177 GTATCTGCTAACTGGGCTGACCTGGCCCTGGCAACTAACTGGGACCG-CAAGTTTAGCCG 235 Query 25589 TAAGCATGTGCCAATTGCGTT 25609 ||||| | ||| | ||||| Sbjct 236 CAAGCAAATCCCACTGGCGTT 256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137971783693800