Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_018087.3 Length=166687 Score E Sequences producing significant alignments: (Bits) Value seq49372 131 2e-25 seq2157 86.0 7e-12 >seq49372 Length=1062 Score = 131 bits (144), Expect = 2e-25 Identities = 338/506 (67%), Gaps = 27/506 (5%) Strand=Plus/Plus Query 36250 AATTTTCCCAAGCAAATTGCCTAAACCAACCACTTGTTATTGAAGTACAAACTTTTTCTA 36309 |||| ||||||| ||||| |||||||| || || || | |||| ||||| ||| Sbjct 347 AATTCTCCCAAGAAAATTCTCTAAACCATCCTGACGTAATACTACTACACACTTTAACTA 406 Query 36310 AAGCCATGTCAAAGGCTTGACGAGGTTTAACATTAAAATTATTTGGGATTAACACACGTT 36369 |||| | ||| |||||||| | || | ||||||||| |||||| ||||| Sbjct 407 AAGCAGTAATAAAACTCTGACGAGGATCAATTTCAAAATTATTAGGGATTTGTGAACGTT 466 Query 36370 CAATCGCAAGAACATATGCTTCTTCTAATACACCCAATAATTGAATTTCCCGAGGTTGTG 36429 | | ||||||||| ||| |||||| ||||||||||||||| || ||| |||| Sbjct 467 CTAATGCAAGAACACATGTTTCTTCATATACACCCAATAATTTAACTTCATCGCTCTGTG 526 Query 36430 CAAAAAATTTCTCT---CTTGAGCTTTTAACTTCTTGATCATATTCCATATAATACATAT 36486 |||| || || ||| |||| | |||| ||| | | | | ||||| | ||||| Sbjct 527 CAAAGAACTTTTCTTTACTTG---TCATAACGTCTGCACCTTCCACAATATAGTTCATAT 583 Query 36487 ATGCAGGTCTATCTAAAACTTTAACTGCATTATGAATAGAATCGTGATCATACACATATG 36546 |||||||| | || | ||||| | || | ||||||| ||| || ||||| | || Sbjct 584 ATGCAGGTTTGTCAAGTACTTTTATCGCTTCGTGAATAGTATCATGGTCATAAATGTAGT 643 Query 36547 CAAAA---TTTGAATTAAAGAA--ATCCGATTTGCTCA-CATTTAATTTAGGATGCGAAT 36600 || | | | | ||||||| | | || || | || || | |||||| || Sbjct 644 TAACACCGTCTCCACTAAAGAAGCTTGCCTTTGACTGATCAAGTACT---GGATGCTTAT 700 Query 36601 AATCATAAGTTTCTTTTTCACGTAACTTTAACCATTCTT--CG-------TCATAAACTT 36651 ||| ||| |||||||||||||| || || || ||| | || |||| | | Sbjct 701 AATTATACGTTTCTTTTTCACGCAATTTAAAAATTTCGTGCCGTACCAGATCATCCATAT 760 Query 36652 TTGCACCAATTTTTTGCAAATTGCGAATAGTCACCAT-TGTCTTTCTAAAATGAGGTGAA 36710 ||||||| | ||| ||| | |||| |||| || ||||||| |||||| || ||| Sbjct 761 TTGCACCTAATTTACGCATCTGCATAATA-TCACGATGTGTCTTTAGAAAATGTGGAGAA 819 Query 36711 TTTTTAAGATAACGATGAGACCATTT 36736 || | |||||||| || ||||| Sbjct 820 TTACGCAAGTAACGATGTGA-CATTT 844 >seq2157 Length=10186 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 75945 TGGTGGGCCTCCCCAGACTTGAACTGGGAACCAACGGATTATGAGTCCGCTGCTCTAACC 76004 ||||||||| | | |||| |||| | | ||||| ||||||||||||| ||||||||||| Sbjct 9522 TGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACC 9581 Query 76005 AATTGAGCTAAAGGCCC 76021 || ||||||| |||||| Sbjct 9582 AACTGAGCTATAGGCCC 9598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532401835836000