Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_018282.1 Length=61167 Score E Sequences producing significant alignments: (Bits) Value seq89998 98.7 4e-16 seq83684 98.7 4e-16 >seq89998 Length=593 Score = 98.7 bits (108), Expect = 4e-16 Identities = 111/147 (76%), Gaps = 9/147 (6%) Strand=Plus/Minus Query 5616 GAGGAGTTCGACTATGGATATGCGCTCACCGTCCACAAGTCGCAGGGCTCCCAGTGGAAC 5675 || || |||||||| || ||||||||||||||||| ||| ||||||| || |||||| || Sbjct 566 GACGACTTCGACTACGGCTATGCGCTCACCGTCCATAAGGCGCAGGGGTCGCAGTGGGAC 507 Query 5676 AACGTCCTGCTGTTTGATGAGTGGTACGGG----AAGGA---CCGGAAGGAATGGTTGTA 5728 ||||| |||||| || ||| | | ||| ||||| || || ||| | || Sbjct 506 CACGTCAGGCTGTTCGACGAGAGCT--GGGCCTCAAGGATTCGCGCGAGCGCTGGCTCTA 449 Query 5729 CACCGCCATTACCCGGGCCGCGGAACG 5755 ||||||||| ||||| ||||| ||||| Sbjct 448 CACCGCCATCACCCGCGCCGCAGAACG 422 >seq83684 Length=502 Score = 98.7 bits (108), Expect = 4e-16 Identities = 177/257 (69%), Gaps = 4/257 (2%) Strand=Plus/Minus Query 4999 AGGCCGCGCTGCTCGTGGTGGATGAGTATTCCATGATTGACGAGCAGATGGGGGAGGACT 5058 |||| ||||| || | | ||||| | || ||| | || |||||| | || ||||| Sbjct 321 AGGCAGCGCTCATCATCATCGATGAATGCTCGATGGTGGATGAGCAGCTCGGCAAGGACC 262 Query 5059 TGCTCAGCTTCGGTTGCCCGATCCTCGCCCTGGG-CGATCCCGGACAGCTCCCGCCCGT- 5116 || | ||||| || || | || | ||||| ||||||||||||||| ||||| || Sbjct 261 TGATGAGCTTTGGCACGCCTGTTCTGGTGCTGGGGCGATCCCGGACAGCTTCCGCCGGTA 202 Query 5117 --GGGCGGCACCCCCTTCTTCAAGAACAAGCCCGACATCCTGCTCACGGAGATTCACCGC 5174 |||||| |||| | || | |||| ||| | || || |||| || || || Sbjct 201 TCGGGCGGTGGTTACTTCACCGAGCAGGAGCCAGACTTTCTTCTGTCGGAAATCCATCGT 142 Query 5175 CAGGCCCAGGACAACCCGATCATCTGGATGTCCAAGGAGGTCCGCGAGGGCCGCGTGCTC 5234 ||||| ||||||||||||| ||| | | ||| ||| || || ||||| |||| | || Sbjct 141 CAGGCGAAGGACAACCCGATTATCCAGCTTGCCATGGATGTGCGAGAGGGACGCGAGATC 82 Query 5235 CGCCCCGGCGACTACGG 5251 | ||||||||||| Sbjct 81 ATGCGTGGCGACTACGG 65 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 195310125869400