Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq2641 141 7e-29 seq28556 111 1e-19 seq30797 82.4 6e-11 >seq2641 Length=263 Score = 141 bits (156), Expect = 7e-29 Identities = 146/190 (77%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| | ||| || ||||||||||| || || ||||||||||| | |||| |||| || Sbjct 229 AACCAGATGCAGAGTAGATTCTTTCTGAATGTTGTAATCGGCAAGGGTTCGACCATCTTC 170 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 ||| |||||||| ||||| || | || ||||||||||| ||||| || || || ||||| Sbjct 169 CAACTGCTTACCAGCAAAGATGAGTCGTTGTTGATCGGGGGGAATACCCTCCTTGTCTTG 110 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 ||||| | ||| ||| | || | ||| || || | ||| |||||||| |||| || || Sbjct 109 AATTTGGT-TTTGACATTGTCGATAGTATCCGAAGATTCAACTTCAAGGGTGATAGTCTT 51 Query 101440 GCCGGTTAAA 101449 |||||| ||| Sbjct 50 GCCGGTCAAA 41 >seq28556 Length=388 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || ||||||||||| || ||||| || |||||||| | || || | | |||| ||| Sbjct 74 ACCAAGTGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAGAGGGTACGGCCATCTTCC 133 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || || | |||||| || || || |||||||||||||| || || Sbjct 134 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCTTTGTCCTGG 193 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || ||| | || | || || || | || ||||| || |||| || ||| Sbjct 194 ATCTTCGACTTGACATTGTCAATGGTATCCGAAGACTCTACTTCTAGCGTGATGGTCTTG 253 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| | || || || || || ||||| Sbjct 254 CCGGTGAGGGTCTTGACGAAGATTTGCAT 282 >seq30797 Length=220 Score = 82.4 bits (90), Expect = 6e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 101330 CCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGT 101389 || ||||| |||| |||||| || || || ||||||||||| || || ||||| || Sbjct 219 CCAGCAAAGATCAGACGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGAATCTTCGAC 160 Query 101390 TTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAA 101449 |||||| | || | ||||| || | ||||| |||||||||| || || || || ||| Sbjct 159 TTTACATTGTCGATGGTGTCGGAGGACTCCACCTCAAGAGTGATGGTCTTTCCAGTCAAA 100 Query 101450 GTTTTTAC 101457 || || || Sbjct 99 GTCTTGAC 92 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395649097517100