Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_018832.1 Length=58104 Score E Sequences producing significant alignments: (Bits) Value seq76547 102 3e-17 seq98424 93.3 2e-14 seq129722 91.5 5e-14 >seq76547 Length=445 Score = 102 bits (112), Expect = 3e-17 Identities = 212/310 (68%), Gaps = 13/310 (4%) Strand=Plus/Minus Query 45885 TGGGCGAGCCTAGCGCAGACAAACCGTTCGCATTTTCAGACGGTTTAGCGATTATCCCGA 45944 ||||| ||| || ||||||||||| || || || ||||| || || || |||| Sbjct 318 TGGGCAGGCC-AGTGCAGACAAACCTTTTGCTTTCGTTAACGGTACCGCCATCATTCCGA 260 Query 45945 TCCACGGAACCTTAATTAACCGCTTCGGTGGTTATTATTACGGCTACGTCACCGGATACA 46004 | ||||| | | | |||||||||| |||||| ||||||| || ||||| |||||||| | Sbjct 259 TTCACGGTAGCCTGATTAACCGCTACGGTGGCTATTATTTTGGGTACGTAACCGGATATA 200 Query 46005 ATTTTATTCGAAGCCAG--CGCAAT-GCCGCATTAGCCGACCCAGACGTCAAAGCAATTA 46061 | || || || | ||| ||| | || ||| | | ||| || ||| | |||| Sbjct 199 ACTTCATCCGTCGTCAGGCTGCACTGGCGGCAATGGACGA---TGATGTCGAGCGTATTA 143 Query 46062 TTTACGACGTTAATTCAAACGGTGGCGAGGCAGCAGGCTGTTTTGAGTTATCCAGAGAAA 46121 ||| || || || || ||||| ||||| | || ||||||||| | || |||| Sbjct 142 TTTTTGATGTGAACAGTAATGGTGGTCAGGCATCCGGTTGTTTTGAGCTTGCCGCAGAAC 83 Query 46122 TGCGCGAAACACGCGGAGACAAGCCGTCACTGGCCGTTGTCGATTCCAACTGCTACTCCG 46181 | ||| || | | || ||||| | |||| || || ||| | ||||| || || | Sbjct 82 T-CGCCAACCTC-----GAAAAGCCAACGATGGCGGTCGTGGATGCGAACTGTTATTCAG 29 Query 46182 CTGCATACGC 46191 | |||||||| Sbjct 28 CAGCATACGC 19 >seq98424 Length=301 Score = 93.3 bits (102), Expect = 2e-14 Identities = 196/291 (67%), Gaps = 1/291 (0%) Strand=Plus/Plus Query 761 TTCGCAGGCGGATTTATCGAGTGGAACGACCCGCAGTATGGCGTGGAACGTCGCGGCATC 820 ||| | ||||| || ||||| |||| || |||||| || |||||||||| ||| Sbjct 3 TTCACGGGCGGTTTCATCGAATGGATAGATCCGCAGCGCGGTACTGAACGTCGCGCCATT 62 Query 821 GAATCACACAAGGGCGATACAATCACGATATTCGGTACCGTCGATGGACTCGCTGGCGGA 880 || | |||| | | | || | | | ||||| ||| ||||| || || || Sbjct 63 GAGACGCACACCGACAACACGCTGGTGTT-TTCGGCGTGGTCAGCGGACTGGCCGGTGGC 121 Query 881 TTTATACTAAAAACATACCCAGGCTGCCCGCGTACAGCGACAGCATGTAATACTATTTTC 940 | | | || || || || |||||||| || | | || || | | | ||| Sbjct 122 ATGGTCATTAAGGTTTATCCTGGTTGCCCGCGCACGTCAGCTGCGTGCCAGAGTCGTTTT 181 Query 941 AATAATCTGGCCAACTATGGCGGCGTGCCAACAATGCCAGACCGCTCGCCGTTCGATGGC 1000 || || |||| ||| ||||||||| | ||||||| ||| |||||||| || ||| Sbjct 182 AACAACCTGGACAATTATGGCGGCATCATCTCAATGCCGTCCCGTTCGCCGTTTGACGGC 241 Query 1001 GATCCAATCTTCTAAGGGGGTAATTATGTGGTGGGCACTAGCGATGCTCGT 1051 ||||| |||||||||||| | ||||||||||||| |||| ||||| || Sbjct 242 AATCCAGTCTTCTAAGGGGAAAGCTATGTGGTGGGCATTAGCCATGCTGGT 292 >seq129722 Length=886 Score = 91.5 bits (100), Expect = 5e-14 Identities = 102/134 (76%), Gaps = 2/134 (1%) Strand=Plus/Plus Query 51054 ACTACTACTTCCCGAAAGTGTCTATCGCGCCAGACGGTGACTATGCACTGAAAGGGGATG 51113 |||||| ||||||||||||| | | ||| || || |||||||| ||||| || |||| Sbjct 11 ACTACTTCTTCCCGAAAGTGGCGCTGCAGCCGGATGGCGACTATGCGCTGAAGGGTGATG 70 Query 51114 ACTGGCAGGTCATTTCATTCACGTTCAAAGCGATGCAGCT-TAACAGCCGTACGCAACGT 51172 |||||||||| || || ||||||||| || || |||| | | |||||| | || Sbjct 71 ACTGGCAGGTTATGTCGTTCACGTTCTCTGCACTGAAGCTGGGATCGGCGTACG-AGCGC 129 Query 51173 GTTTACATCGACGT 51186 ||||||||||| || Sbjct 130 GTTTACATCGATGT 143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185523692007600