Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_018843.1 Length=103299 Score E Sequences producing significant alignments: (Bits) Value seq31280 563 6e-156 seq36028 174 1e-38 seq87025 123 2e-23 seq46735 113 3e-20 >seq31280 Length=10079 Score = 563 bits (624), Expect = 6e-156 Identities = 1217/1805 (67%), Gaps = 60/1805 (3%) Strand=Plus/Minus Query 68279 CAGCTGGCGAGCAAGTATCTCGTTCAAAACCGTGTAACTGGCGCTATCTACGAAGGGCCA 68338 ||||||| |||| ||||| ||||| ||||| || | || | ||||||||| | | Sbjct 1913 CAGCTGGAAGGCAAATATCTGGTTCAGAACCGCGTCTCCGGTGAGATCTACGAAAGCGCC 1854 Query 68339 CAGCAACTCTACATGCTGGTCGGCATGTGCCTGTTC-CAGAATTGGGAAGATGGCTGCGC 68397 ||| || ||||| ||||| | | ||||||||| ||| | | ||| Sbjct 1853 CAGTTCCTGTACATTCTGGTAGCCGCCTGCCTGTTCTCAGGCTA-----------TCCGC 1805 Query 68398 CGGTAAGACGCGTCTGGAGATGGTTAAGGGCTTCTACGATGTGACCAGTACATTCAAGTT 68457 || ||| || |||| | ||| | |||||||||| || || || || | Sbjct 1804 --GTGCGACCCGGATGGATTACATCAAGCGTTTCTACGATGCGATTTCCACGTTTAAAAT 1747 Query 68458 GTCTCTGCCAACGCCAATTATGGCCGGCGTGCGCACCCCTACTCGCCAGTTCTCCAGCTG 68517 || ||||| |||||||| ||| | || ||||| || || || || |||||| | ||| Sbjct 1746 CTCCCTGCCGACGCCAATCATGTCGGGAGTGCGTACGCCAACCCGTCAGTTCAGCTCCTG 1687 Query 68518 CGTGCTGATTGAAGCTGCTGATAGTCTGAAAGGGATTAGCGCTGCGTCTTCCGCAATCAT 68577 || ||||||||| || || || ||| | || | ||| | || ||| || | Sbjct 1686 TGTCCTGATTGAATGTGGCGACAGCCTGGATTCCATCAACGCGACCTCCAGCGCTATTGT 1627 Query 68578 CGACTACGTGTCACGTCGCGCGGGCATTGGTATTGGCTTTGGGCGTCTGCGTGCGCTGGG 68637 | ||||| |||| ||||| || ||||||||| | || ||| | || |||||||| Sbjct 1626 GAAATACGTTTCACAACGCGCAGGTATTGGTATTAACGCGGGTCGTATCCGCGCGCTGGG 1567 Query 68638 CAGTGAGATCCGCAATGGCGAGGCCACCCACACTGGCGTTTTTCCATTCCTGAAACACTT 68697 ||| ||| ||| || || || ||| || || | | || ||| || ||||| Sbjct 1566 CAGCCCGATTCGCGGCGGTGAAGCTTTCCATACCGGTTGTATCCCGTTCTACAAGCACTT 1507 Query 68698 CCAGACGGCGGTGAAATCCTGCTCTCAGGGCGGTGTTCGCGGCGGCGCTGCTACAGCGTT 68757 |||||| |||||||||||||| || |||||||| || || |||||||| || || ||| Sbjct 1506 CCAGACAGCGGTGAAATCCTGTTCGCAGGGCGGCGTCCGTGGCGGCGCAGCGACGCTGTT 1447 Query 68758 CTATCCGATCTGGCACTTGGAAGTTGAAAGTCTGCTGGTGCTGAAAAACAACCGTGGCAT 68817 ||||||||| ||||| ||||||| ||||| ||| | || ||||||||||||||||| | Sbjct 1446 CTATCCGATGTGGCATCTGGAAGTAGAAAGCCTGTTAGTCCTGAAAAACAACCGTGGTGT 1387 Query 68818 TGAAGAGAACCGCGTTCGTCATCTCGACTATGGCGTGATGATCAACCGTCTGATGTATCG 68877 |||| |||||||| ||||| | ||||| || ||| | ||||| ||||||| | Sbjct 1386 GGAAGGTAACCGCGTACGTCACATGGACTACGGTGTGCAGCTCAACAAAATGATGTACCA 1327 Query 68878 CCGCCTGGTGCGCAACGAAAACATTACGCTGTTCAGCCCACACGATGTGCCGGGCCTGTA 68937 |||||| || ||| |||| |||||||| ||||| || || || |||||||| Sbjct 1326 GCGCCTGCTGAAGGGCGAGGACATCACGCTGTTTAGCCCGTCAGACGTACCTGGCCTGTA 1267 Query 68938 CGACGCGTTCTTTGTTGATCAGGACAAGTTCGAAGAGCTGTACCTGAAGTACGAAGCCGA 68997 ||| |||||||||| ||||||||| | || ||| || ||| || |||||| || Sbjct 1266 CGATGCGTTCTTTGCCGATCAGGACGAATTTGAACGTCTTTACACCAAATACGAACAAGA 1207 Query 68998 CGAGAGCATCCGTAAGAAATCTATCCCGGCCGTCGACCTGTTCTCTACGCTGATGCAGGA 69057 | ||||| |||||| | | | || || || |||||||| | |||||||||| Sbjct 1206 CAGCAGCATTCGTAAGCAGCGTGTGAAAGCGGTAGATCTGTTCTCGCTGATGATGCAGGA 1147 Query 69058 GCGTGCCTCCACTGGTCGTGTTTATATTGCCAACGTCGACCACATGAACGATCACGGCGC 69117 || ||||| || || || | || || ||||| |||||| ||| ||| || | Sbjct 1146 ACGCGCCTCTACCGGCCGCATCTACATCCAGAACGTTGACCACTGCAACACACACAGCCC 1087 Query 69118 ATTCGTTCCGGAAATTGCACCGGTACACCAGTCCAATCTCTGTATGGAGATCACGCTACC 69177 || | | ||||| || || | |||||| || || ||| |||| || |||| || Sbjct 1086 GTTTGACGCCAGTATTGCGCCAGTGCGCCAGTCGAACCTGTGTCTGGAAATTGCGCTGCC 1027 Query 69178 GACCAAGC----CACTGGCGTTCACTGACGATCCGAACGGGGAAATCGCGCTTTGCACCC 69233 || || | || || || ||| ||||| ||||| || || ||||| || || | Sbjct 1026 AACTAAACCGCTCAATGACG-TCAACGACGA---AAACGGTGAGATTGCGCTCTGTACGC 971 Query 69234 TGTCTGCGTTCAACCTGGGCGCGATCCGCACGCTGGACTCACTGAAAGACGTGGCGTTTT 69293 |||| || || ||||| || ||||| || |||||| ||| |||| |||| Sbjct 970 TGTCAGCATTTAACCTTGGTGCGATTGACAGCCTGGACGATCTGGAAGAGCTGGC----C 915 Query 69294 ACGCTG--TG-GCG-GCACTGGACTCTCTGCTCGACTATCAGGACTACCCTATGGCTGCT 69349 |||||| || || || ||||| | ||||| || |||||||| ||||| || | || Sbjct 914 ACGCTGGCTGTACGCGCGCTGGATGCACTGCTGGATTATCAGGATTACCCGATTCCGGCC 855 Query 69350 GCAGAAATCCCGGCTAAAGCTCGTCGTAGTCTGGGTATTGGCGTGACCAACTTTGCTTAC 69409 || | || | | |||||||| ||||| |||||||| | |||||||||||| Sbjct 854 GCGCAGCGGGGTGCGATGGGTCGTCGTACGCTGGGCATTGGCGTCATTAACTTTGCTTAC 795 Query 69410 TATCTGGCGAAGAACGGCTTTAACTACTCTGAC-GCTGCGGGCAACCAGCTGGTGCATGA 69468 || ||||||||| ||||| | |||||| ||| || ||| | || ||| ||| | Sbjct 794 TACCTGGCGAAGCACGGCGTGCGCTACTCCGACGGCAGCGCG-AATGGCCTGACGCACAA 736 Query 69469 GACCTTCGAAGCCATTCAGTACTACCTGCTCGATGCGAGCTGCCGA-CTGGCCGAAGCGA 69527 ||||| ||||||||||||||||||||||| | || | || ||||| ||| | Sbjct 735 AACCTTTGAAGCCATTCAGTACTACCTGCTGAAAGC-CTCAAATGAGCTGGCTAAAGAGC 677 Query 69528 AAGGTGCATGTGACTGGTTCTCCCACACCAAATACGCACAGGGCCAGCTGCCAGTCGACC 69587 |||| || || |||||| | |||| || ||||||||| ||||| | || Sbjct 676 AAGGCGCCTGCCCGTGGTTCAATGAAACCACCTATGCACAGGGCGTCCTGCCGATTGATA 617 Query 69588 ACTATCGCAAAACGCTGGATAC------CAACCCGGAGACATCTTTCGAGCTGAAAATGC 69641 ||| ||| |||||| | |||| ||| | |||| | || Sbjct 616 CCTACAAGAAAGATCTGGATGCGATTTGCAAC---GAGCC---------GCTGCACCTGG 569 Query 69642 CGTGGGAAGAGCTGCGTGGCCGTATCCGTGAGCATGGTCTGCGTAACTCAACTCTGACCG 69701 |||||| ||||| | | || || || ||||| ||||| || || | | Sbjct 568 ACTGGGAAACCCTGCGCGAGCAGATTAAAACCCACGGCCTGCGCAACTCGACGCTTTCTG 509 Query 69702 CTCAAATGCCGTGTGAGACGTCCAGCCAGATCACCAACTCCACCAATGGTATTGAGCCGC 69761 | | ||||||| ||| || || ||||| | ||| ||||||| ||||| || |||| Sbjct 508 CCCTGATGCCGTCTGAAACCTCGTCGCAGATTTCAAACGCCACCAACGGTATCGAACCGC 449 Query 69762 CCCGCGGCCCGGTATCCG--TGAAGTCTTCCAAAGACGGCATCGTGAAGATGGTCGTTCC 69819 | ||||||| |||| | | || | || |||||||| ||| || ||| || || Sbjct 448 CGCGCGGCC--ATATCAGTATTAAAGCGTCTAAAGACGGTATCCTGCGTCAGGTGGTGCC 391 Query 69820 AGACTTCGCTCAACTGAAAGACCAGTACGAGTACCTGTGGGATATGCCGGATAACCGCGG 69879 || | | | || ||||| |||||||| ||||||||||||||| || || Sbjct 390 GGAATATGAGCGTCTTAAAGATCAGTACGAACTGCTGTGGGATATGCCGTCCAATGATGG 331 Query 69880 CTATCTG--ACTAAGGTGGCCATCATTCAGAAGTTCTTCGATCAGGCCATCTCTGCGAAC 69937 ||| ||| ||| ||| | | | || ||||| ||| |||||||||| || || | || Sbjct 330 CTACCTGCAACT--GGTTGGCGTAATGCAGAAATTCATCGATCAGGCGATTTCGTCAAAT 273 Query 69938 ACCAACTACGACCCGACTCGCTTCCCTGGCGACAAGGTTCCAATGATGAAGCTGCTGGAA 69997 ||||||||||| ||| | |||||||| | ||| || || |||| | | |||||| || Sbjct 272 ACCAACTACGATCCGTCGCGCTTCCCGAATGGCAAAGTGCCGATGAAGCAACTGCTGAAA 213 Query 69998 GATCTGCTGTTTGCGTATCAGCAAGGTGTGAAGACGCTTTATTACCACAACACGCGTGAT 70057 ||||||||| || || || || ||||| ||||| || ||||| ||||| |||||| Sbjct 212 GATCTGCTGACCGCCTACAAGTTTGGCGTGAAAACGCTCTACTACCAAAACACCCGTGAT 153 Query 70058 GGCGC 70062 || || Sbjct 152 GGTGC 148 >seq36028 Length=2231 Score = 174 bits (192), Expect = 1e-38 Identities = 220/302 (73%), Gaps = 3/302 (1%) Strand=Plus/Plus Query 70393 CAACTTTCGTTCTTCTGGCGCCCTGAAGAAGTCGACATTACCACTGACCGCATCGACTTC 70452 || ||||||||||||||||| |||||||||||||| | | || |||||||||| | Sbjct 3 CAGCTTTCGTTCTTCTGGCGTCCTGAAGAAGTCGATGTCTCACGCGATCGCATCGACTAC 62 Query 70453 AATACCAAGCTGCAAGAGCACGAGCGCCATATTTTCCTGAGCAACCTGCGTTACCAGACG 70512 | || |||| || || || ||||| ||| | ||||||||| ||||||||| Sbjct 63 CAGGCC---CTGCCCGATCATGAAAAGCATATCTTCATCAGCAACCTGAAATACCAGACG 119 Query 70513 CTGTTGGATTCCGTTCAGGGTCGCAGTCCTAACGCAACACTGCTGCCGCTGATCTCCATT 70572 | |||| || ||||||| ||||| || |||| ||||||||||||||||||| ||| Sbjct 120 TTACTGGACTCGATTCAGGGACGCAGCCCGAACGTGGCACTGCTGCCGCTGATCTCGATT 179 Query 70573 CCTGAGCTGGAGACATGGGTCGAGACCTGGTCGTTCTCCGAGACGATTCACAGCCGCAGC 70632 || || ||||| || ||| | || |||||| |||||||||| ||||| ||| ||| Sbjct 180 CCGGAACTGGAAACCTGGATAGAAACCTGGGCGTTCTCCGAAACGATCCACTCTCGCTCG 239 Query 70633 TATACGCACATTATCCGCGGTATGGTGGATGACCCTAGCATCGTTTTCGACGGCATCGTC 70692 || || ||||| || ||| || ||| | || || | || || |||| |||||| Sbjct 240 TACACCCACATCATTCGCAACATCGTGAACGATCCGTCTGTGGTGTTTGACGATATCGTC 299 Query 70693 AC 70694 || Sbjct 300 AC 301 Score = 91.5 bits (100), Expect = 1e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 70870 GTGAATGCACTGGAGGCGATTCGCTTCTACGTGAGCTTTGCGTGTACGTTCGCCTTTGGT 70929 || ||||| ||||| ||||| ||||||||||| |||||||| || | || || |||| | Sbjct 474 GTCAATGCGCTGGAAGCGATCCGCTTCTACGTCAGCTTTGCCTGCTCTTTTGCGTTTGCT 533 Query 70930 GAGCGGAAGCTGCTGGAGGGCAACACGAAGATCATGCGCTTTATCGCGCGCGACGAGGCT 70989 ||||| | ||| |||| |||||| | || ||||| | || || |||||||| ||| Sbjct 534 GAGCGAGAACTGATGGAAGGCAACGCCAAAATCATCAAGCTGATTGCACGCGACGAAGCT 593 Query 70990 CTACA 70994 || || Sbjct 594 CTGCA 598 >seq87025 Length=1451 Score = 123 bits (136), Expect = 2e-23 Identities = 419/646 (65%), Gaps = 20/646 (3%) Strand=Plus/Plus Query 59644 GAAGTAGACCGAGCTGCCGCGCTTC---ACTTCGGTGTAATCGAGATAGCCGATC-TCCC 59699 ||||||||| ||||| | |||| |||||| | || || ||||| || ||| || Sbjct 672 GAAGTAGAC---GCTGCGTCCCTTCTGAACTTCGCTATAGTCCAGATAACCAATCCTCTT 728 Query 59700 GCAGCTGCTCCATCGCCTTCCTGACTGTCGCGTTCTGGGTAATGGTGCGGCTGGTTAAGT 59759 ||||||||||| || | |||||| |||||| | || | | | | Sbjct 729 TAAGCTGCTCCATTGCACGGCGCACTGTCTGGTTCTGCGAAAACACAGGAGAGCGCAGAT 788 Query 59760 TAAGTCTGGCGCGTAATCGAGC--CAACGAGATTGGTGCCGGGTCAGGTGGCAAACTTTC 59817 | || || |||||| || || || ||||| || ||||||| |||| ||||| Sbjct 789 TCAGCCTTTCGCGTAGGCGCGCGCCAGAGAGATAGGGGCCGGGTTCTTGGGCAGGCTTTC 848 Query 59818 GATGAAGGTGTAGAGCGCCTGCGCGGATTCTTTTCTGGAGAGTTCGTTGATTGCCCGGAG 59877 ||| |||| ||||||||||| ||||| ||| | ||| ||||||| ||| ||| Sbjct 849 AATGTAGGTATAGAGCGCCTGAGCGGACTCTCGGCGTTTGAGCGCGTTGATCGCCTTGAG 908 Query 59878 TTGCAGAAGAACCTTTTTGTCGAACTGATAGAGTTCGAAAATCTTAGGATCAGCCTGCAG 59937 ||||| |||||| | || |||| ||||| || |||| ||| || ||||||||||| Sbjct 909 CTGCAGTGAAACCTTGTGATCAAACTCGTAGAGCTCAAAAAGCTTCGGGTCAGCCTGCAG 968 Query 59938 CGAGACCGTGTCGTTCTTAGTGCTGTACTTTGCTGTCTGCACAAGGTGCGTCACGTAATA 59997 || |||| || || || ||| |||| ||| || |||||||| | || | Sbjct 969 GATAACAATGTCTTTTTTGGTATCGTA-AAAGCTGACTGGACCAGGTGCGTGATATATTC 1027 Query 59998 CT---CATCAGAGCCTTTACTGCGGA-ATGAGATAGTGTTTGTGGCGATACGAGTTAGAG 60053 | | || ||| | || || | ||||| ||| | |||| ||||| | |||| Sbjct 1028 TTTTGCGTCGTCGCCGCTTTTGAAGAGAAGAGATGGTGGTACTGGCAATACGCTTCAGAG 1087 Query 60054 AACTGTCCAGGCGCTTACGTAACTTCGCGGACGATCTGGCCGTTGGTATGCCACAGAGCC 60113 | | | |||| | | || | || || | | || ||||| |||||| Sbjct 1088 ACGGGCTGATACGCTCTCTGAGCTGCTTTGAGGAGCGACTTGAGGGAATGCCGCAGAGCT 1147 Query 60114 TGACGAACTCGACGAACGGTAACGTGACAGTATCGCCAACAACCTTGTGTTTG------G 60167 || | ||||| || || | | | || | ||||||| ||||||| |||| | Sbjct 1148 TGGCAAACTCTACAAATGAGAGCTGTACCTTGTCGCCAATGACCTTGTCTTTGTGCTTTG 1207 Query 60168 CGAACGCGTGGATGATGCCTACCCACGTTTTGAAGTCGTTATCCATATCCAGACGAACGC 60227 | || | |||||||| || ||||| || ||||| |||||||||||||||| || || Sbjct 1208 CAAAGGAATGGATGATCCCGACCCAGGTCTTGAAATCGTTATCCATATCCAAGCGCGGGC 1267 Query 60228 CGGAGATCCTTATGTCTTCGTACCCTTCGGCTTTGGCCAGAGACAG 60273 || ||| | | ||| || ||||| ||||| || || || || Sbjct 1268 CGACTATCTCAACCTTTTCATAGCCTTCCGCTTTTGCGAGTGATAG 1313 >seq46735 Length=1212 Score = 113 bits (124), Expect = 3e-20 Identities = 172/245 (70%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 80912 ATGACCAGTCAGGAGATCGCCGAAATGGTCGGCAGTCGCCATGACAGCGTAAAACGCACC 80971 || ||||| | || || || || | || || ||||| || |||| || |||| || Sbjct 237 ATAACCAGCTATGAAATTGCTGAGCTTGTTGGTAGTCGTCACGACAAAGTGAAACAGTCC 296 Query 80972 ATTGAAAGACTCGCTAAATCCGGCGTTATTACTTTTCCACCAATGGTGGAAAAGCCCACA 81031 ||||| || ||| | | | || || |||| || ||||||| ||||||| | || Sbjct 297 ATTGAGAGGCTCTCAGAGCGCTCAGTAATAGCTTTACCCCCAATGGGGGAAAAGGCTACT 356 Query 81032 GCCGGGCGTCCGGCTACGTTTTACTTGTTCGAAGCCGAACAGGGTAAACGCGACAGCATC 81091 || || ||||| | | | ||| | ||||||| ||| | || || |||||||||||| Sbjct 357 GCAGGCCGTCCATCAGCATATTATATTTTCGAAGGCGAGCGCGGGAAGCGCGACAGCATC 416 Query 81092 GTTGTCGTGGCACAGCTTTCTCCTGAATTTACCGCACGCCTTGTTGATCGGTGGAGAGAG 81151 | || || || ||||| ||||| || ||||| ||||| | |||||||| ||| ||| Sbjct 417 ATCGTTGTTGCTCAGCTCTCTCCCGAGTTTACTGCACGTTTGGTTGATCGCTGGCATGAG 476 Query 81152 CTTGA 81156 ||||| Sbjct 477 CTTGA 481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 329907263658000