Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_018846.1 Length=60894 Score E Sequences producing significant alignments: (Bits) Value seq43257 132 2e-26 >seq43257 Length=1618 Score = 132 bits (146), Expect = 2e-26 Identities = 176/243 (72%), Gaps = 6/243 (2%) Strand=Plus/Minus Query 28779 GTGCCACTGACCGAACCTCAGAAAGCGGGGATCGCGTCATTCTGTCCTTACAACATTGGC 28838 || |||||||||||||| ||||| | || || |||||||||||||| | ||||||||| Sbjct 850 GTTCCACTGACCGAACCGCAGAAGGTTGGCATAGCGTCATTCTGTCCGTGGAACATTGGC 791 Query 28839 CCCGGTAAGTGTTTCCCGTCGACGTTTTAT---AAACGAATTAATGCAGGCGATCGCAGG 28895 |||||||| || | || || ||||| || |||| || | |||||||||||| | Sbjct 790 CCCGGTAAATGCCTGCCATCAACGTTCTACCGGAAACTAA---ACGCAGGCGATCGCCTG 734 Query 28896 GGAGCGTGTGAAGCGATTCGCTGGTGGATTAAGGACGGTGGCAGAGACTGCCGTATCCGC 28955 || || |||| || ||| | ||||| ||||| || | ||| ||||| || ||| Sbjct 733 GGTGCATGTGCAGAGATAAAGCGCTGGATATTCGACGGCGGGAAAGATTGCCGCATTCGC 674 Query 28956 TCAAATAATTGCTACGGTCAGGTATCCCGTCGCGACCAGGAGAGTGCGCTGGCATGCTGG 29015 || ||| || ||||| || || ||| || |||||||| | ||| |||||||| Sbjct 673 TCTAATGGCTGTTACGGGCAAGTTATCCGCCGTGACCAGGAATCAGAGCTCACATGCTGG 614 Query 29016 GGT 29018 ||| Sbjct 613 GGT 611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194437877601600