Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_019405.1 Length=215710 Score E Sequences producing significant alignments: (Bits) Value seq55576 358 9e-94 seq33294 205 1e-47 seq37656 201 2e-46 seq8838 172 8e-38 seq98211 156 6e-33 seq35885 132 7e-26 seq75989 105 9e-18 seq96425 102 1e-16 >seq55576 Length=704 Score = 358 bits (396), Expect = 9e-94 Identities = 510/702 (73%), Gaps = 17/702 (2%) Strand=Plus/Minus Query 136674 GGTGTGGACGATGTCCACGAGGTC-CTTCTGGGCCTCCATGACCGCGTCGATGTCCTTGT 136732 |||||| || | ||||| | || | |||||| ||||| ||| ||||||||||||| Sbjct 694 GGTGTGCACCACTTCCACCAACTCGCGGCTGGGCGTCCATTACCTGATCGATGTCCTTGT 635 Query 136733 AGGCCATCGGG-ATTTCGTCGATCACGCCAGCGTCCTTGCGGCACTCCACGCCCT-CGGT 136790 |||||||||| ||||||||||||||| | |||||||||||||| ||||| | | || Sbjct 634 AGGCCATCGGTTATTTCGTCGATCACGTCGGCGTCCTTGCGGCATTCCACACTGAGCCGT 575 Query 136791 GGCCTTGATCTGGTCCTCC-AGGGTGAAGGTCGCCTTGGCCTGGGTCCGCGACATCGTCC 136849 ||| |||||| |||| | | ||||||| | ||| |||| ||| || ||| || | Sbjct 574 GGCGCGGATCTGATCCTTCGATGGTGAAGACCTTCTTCGCCTTGGTTCGGCTCATGGTGC 515 Query 136850 GGCCCGCGCCGTGCGAGCACGAGCAGAACGAGTCCGCATTGCCCTTGCCGCGCACGATGT 136909 | || |||||||| ||| |||||||||| ||| | || ||| |||||||||||||| Sbjct 514 GCCCGGCGCCGTGGCTGCAGGAGCAGAACGCCTCCTCGTTACCCAGGCCGCGCACGATGT 455 Query 136910 AGGACTTGGCCCCCATCGAGCCGGGGATGATCCCGAACTGGTCCTTCTGCGCCGACACCG 136969 || |||||| ||||| |||||||||||||| || | | | |||||| ||| ||||||| Sbjct 454 AGCTCTTGGCGCCCATGGAGCCGGGGATGATGCCCAGTTCGCCCTTCTTCGCTGACACCG 395 Query 136970 CGCCCTTGCGGGTCACGAAGACCCACTCGTCGAAGTGGAATTCCTTCTGGACGTAGTTGT 137029 |||| || ||||| || | ||| || ||||||| ||||||||| |||||||||| Sbjct 394 CGCCTTTACGGGTTACCAGCACCTCTTCACCGAAGTGACGTTCCTTCTGCACGTAGTTGT 335 Query 137030 GGTGGCAGTTCACCGCTTCCTTGTCCGTCTTGAACGGCGGCAGGCCCGACGCCCGCATG- 137088 ||||||||||||| || ||| | || || |||||| | | | ||| |||| || Sbjct 334 GGTGGCAGTTCACTGCCTCCAGGGCCACCTCGAACGGTTTGACGATC-ACG-CCGCGTGC 277 Query 137089 -GCCTCCAGGACCCGGACCATCATCATCTCGCGGTTGATCCGCGCGAAGTCCTGGCCCCA 137147 ||| | | ||| |||||||| | ||||||| | ||||||||||| |||| Sbjct 276 CGCCGCGATCACCGCATGCATCATCAGCGCGCGGTTCTGCTTGGCGAAGTCCTGCGCCCA 217 Query 137148 GGCGACGGCTTCCACGTAGTCGTGGAACT-CCGGCTCGCCTTCGCAGAGCCAAGCAAGGT 137206 | | || |||||||| ||||| | ||| | | |||| |||||| || | || |||| Sbjct 216 GCCCACAGCTTCCACATAGTCATCGAAGTGCTGGCT-GCCTTCCTCGAAGTAGGCCAGGT 158 Query 137207 CCTTGTCCAGCGGCTTGCGCCCGTCACGACGCAGCATCATCTCCTTGGCCTTCTCGATGA 137266 | ||| || | ||| || | |||| ||| ||| |||| ||||||| Sbjct 157 CACGATCCGGCAGGTTGGCGATGTGCTGGCGCA-TATC--GGCCTGGGCCAGTTCGATGA 101 Query 137267 AGATGCGGCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGGAGCATCACCCAGACGC 137326 | | | |||||||| ||| || || |||||||| || ||| ||||| | |||||||| Sbjct 100 ACAGGTTGCCGATGGCGTTACCCACACCGCGCGAACCGCTGTGCAGCATGAACCAGACGC 41 Query 137327 G--CTGGTCCTCGTCGAGGCAGACCTCGATGAAGTGGTTGCC 137366 | ||| | || || |||||||| |||||||| |||||||| Sbjct 40 GGCCTG--CTTCATCCAGGCAGACTTCGATGAAATGGTTGCC 1 >seq33294 Length=727 Score = 205 bits (226), Expect = 1e-47 Identities = 399/576 (69%), Gaps = 24/576 (4%) Strand=Plus/Minus Query 84516 CCAGGCGCTTCTTCAGCCAGCGGTTCTTGACGGCGAACGAGCCCGACAGGGTCTTGTGCA 84575 ||||| ||||||||| | |||||||||| ||||| ||||||||| |||||||| Sbjct 629 CCAGGATCTTCTTCAGATACGGGTTCTTGACCGCGAAGCTGCCCGACAGCGTCTTGTGGG 570 Query 84576 GGAAGGTGTTGGCCGGGATCGGCTCGATCGACGGCGA-GGTGCCTCCGCAGAGGATCGAG 84634 | || | |||||||||||||||||||| | |||| |||||| ||||||| ||||||| Sbjct 569 TGTAGATATTGGCCGGGATCGGCTCGATGCA-GGCGCTGGTGCCGCCGCAGATGATCGAG 511 Query 84635 GACGAGGCGTTGGGCGCCACGGCCAGCTTGTGGGCGAACCGCTCGCCCGTGCCTTCCATG 84694 ||| ||| | ||||| | |||| |||| | | || ||||| | || | | | | Sbjct 510 ATCGACGCGGTCGGCGCGATCGCCATCTTGCAG-CTAAGCGCTC---CATGACGCCGACG 455 Query 84695 TC--CGGCGCCTCG-------CCGCGCTCCTTGCCCAGCAGCAGGGAAGCCGCGTCGGCC 84745 || ||||| | | ||||||||| | | ||| || || ||| || || Sbjct 454 TCGGCGGCGTCCGGGCACGGCCCGCGCTCCGCGGCGAGCGTCATCGACGCCTGGTTCACC 395 Query 84746 TGCTTGCGCATGTGGGCGAACAGTTCCAGGTTC-AGCCGGCGGGCGGCGTGACTCTCGAA 84804 ||| | ||||| ||||| ||||||| ||| || | || | | |||||| Sbjct 394 TGCGCGTTGATGTGCTTGAACATGCGCAGGTTCCAGCTCTTGGCCATCGCGCC-CTCGAA 336 Query 84805 CGGGATGTCCAGCATCTGGAGCAGCGAGTGGAAGCCGAGCAGGCCCAGGCCCACCGACCG 84864 ||| | | || ||| || | |||||||||||| | || |||||| |||||||| || Sbjct 335 CGGCAGCCCGCGCG-CTGCAGGAACGAGTGGAAGCCCATCACGCCCAGACCCACCGAGCG 277 Query 84865 TTCGCGCACGGCGCTGTAGGCGGCGCGGTGCAT--CTCGTCCGGCGCGTTGTCGATGAAC 84922 |||||| | ||||| ||||| ||||| | ||| | || || ||| ||||||| | Sbjct 276 CTCGCGCGCCGCGCTATAGGCCGCGCGCTCCATGCCGGGTTCGTGGCG--GTCGATGTAA 219 Query 84923 ACCTGGAGGCAGTTGTCCAGCATGCGCAGCAGGTCTTCGATGAAGGTCGGGTGATCCCGC 84982 |||| ||| |||||| || | ||||| || ||| |||| |||| | | ||| | Sbjct 218 TCCTGCAGGACGTTGTCGAGGAAGCGCATCACGTCCTCGACGAAGCCCTTCTCGTCCTTC 159 Query 84983 CACTCCGGCCACTTCTCGGCGTTGACGCTGGAGAGGCAGCAGACGGCGGTCCGCATCTTG 85042 |||| |||| ||||| ||||| || ||||||||||| ||||| || ||| Sbjct 158 CACTGGTCCCACGTCTCGAGGTTGAGCGACGACAGGCAGCAGACCGCGGTGCGGTCGTTG 99 Query 85043 CCGAAGAT-GTCGCGGCCCGAGCCCAGCATGATCTC 85077 ||| |||| |||||| ||| | |||| ||||||| Sbjct 98 CCG-AGATGGTCGCGTGCCGGTCGCAGCGTGATCTC 64 >seq37656 Length=523 Score = 201 bits (222), Expect = 2e-46 Identities = 273/370 (74%), Gaps = 13/370 (4%) Strand=Plus/Plus Query 137022 GTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCGTCTTGAACGGC-GGCAGGCCCGACG 137080 |||||||||||||||||||||||| || | || || ||||| ||| | | || Sbjct 1 GTAGTTGTGGTGGCAGTTCACCGCCTCGGCCTGCGCCTCGAACGCTTGGCGATCAC--CG 58 Query 137081 CCCGCATGGCCTCCAGGACCCGGACCATCATCATCTCGCGGTTGATCCGCGCGAAGTCCT 137140 || | ||||| | || | | |||||| |||||||||||||||||||| || || Sbjct 59 TGCGGACCGCCTCGACCACGCTGCGCATCATGATCTCGCGGTTGATCCGCGCATAGCGCT 118 Query 137141 GGCCCCAGGCGACGGCTTCCACGTAGTCGTGGAACTCC-GGCTCGCCTTC--GCAGAGCC 137197 | ||||| | || || |||||||||| | | | | |||| |||||| ||||| Sbjct 119 GCGCCCAGTCCACCGCGAACACGTAGTCGCCGTAGTGCTGGCT-GCCTTCCGGCAGAT-- 175 Query 137198 AAGCAAGGTCCTTGTCCAGCGGCTTGCGCCCGTCACGACGCAGCATCATCTCCTTGGCCT 137257 | || ||||||| |||| || | ||| | || | ||| |||| ||||||||| Sbjct 176 AGGCCAGGTCCTGGTCCGGCAGGTTGATCA--TCCAG-CGCCGCATTTCCTCCTTGGCAA 232 Query 137258 TCTCGATGAAGATGCGGCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGGAGCATCA 137317 || ||||||| | |||||| | ||||||||||||||||| |||||||| ||||||| Sbjct 233 GCTGGATGAAGTGGTTGCCGATCGCATTGCCGACGCCGCGCGA-CCCGAGTGCAGCATCA 291 Query 137318 CCCAGACGCGCTGGTCCTCGTCGAGGCAGACCTCGATGAAGTGGTTGCCGCCGCCCAGGG 137377 |||| || ||| || ||||||||||| | |||||||||||||||||| ||||||| | Sbjct 292 CCCACACCCGCGCCTCTTCGTCGAGGCACAGCTCGATGAAGTGGTTGCCACCGCCCAACG 351 Query 137378 TGCCCAGTTG 137387 ||||||| || Sbjct 352 TGCCCAGCTG 361 >seq8838 Length=703 Score = 172 bits (190), Expect = 8e-38 Identities = 285/406 (70%), Gaps = 18/406 (4%) Strand=Plus/Plus Query 83394 CTCTCGTCGCGGATCGACCACTCGACGATCGTGGTCATGCCCTTCATGCGATTGCGACGC 83453 ||||||||||| | |||||| ||||||| | |||||||||||| ||| ||| Sbjct 283 CTCTCGTCGCGCACCGACCAGCTGACGATCTGGCCCATGCCCTTCATCTTGTTGAAGCGC 342 Query 83454 TGGAAGGACATCAGCAGAGCGAAGGACGAGAAAAGCTGCATCCCCTCGCCGAAGGCCGAG 83513 ||||| |||||||| |||||||||| ||| |||| || |||||| |||| | | Sbjct 343 GGGAAGTTCATCAGCATCGCGAAGGACGCGAACAGCTTCACGCCCTCGGTGAAGCCGCCG 402 Query 83514 AACACGGCGATGTCGACCATCAGGTCGGCGATCGAGTTGCCGCTGTC----CCGA-TTGA 83568 |||| ||| || | | ||||||| | | ||||||| |||| || Sbjct 403 AACATGGC---------CAGC-GTACGGCGATGTCCTCGTCGCTGTCGACGCCGAATTCT 452 Query 83569 ACATGTACTCGTGCTTCTCGCGCATCGCCTCGTAGTCGAGGAAGGCGCGGAACTCGACCT 83628 |||||| || ||||| || |||| | | || ||||||||||||| | ||||| || Sbjct 453 GCATGTAATCATGCTTGTCCTTCATCTCGCCATATTCGAGGAAGGCGCCGTACTCGCTCT 512 Query 83629 CGGGCAGGCCCAGGGTGTCGATCAGCGT-CGAGTAGGCGTCGATGTGGTTGGCCTCGGCG 83687 |||||| ||| | ||||||| ||| || |||||| || ||||||| | ||| | Sbjct 513 CGGGCATGCCGATCGTGTCGAGCAGGGTGCGAGTAAGCCGCGATGTGCACCGTCTCCATG 572 Query 83688 GCGATGAACGCGCCCAGCATCATCCGCACTTCCGGGTGCGGGAA-GCGCGGGCCGTACTT 83746 | |||||||| |||||||||| | || | || ||| ||| ||||||| || Sbjct 573 TTGCTGAACGCGGTCAGCATCATCTTGATCTCGGTCGGCTTGAACACGC-GGCCGTATTT 631 Query 83747 CTCGAAGTAGCCGCGCGCCACGTCGACGTCGGCCTGGGTGAAGAAC 83792 |||| ||||| | | ||| |||||||||||||||||||||||| Sbjct 632 CTCGTGGTAGCAGTCCTGCACCTCGACGTCGGCCTGGGTGAAGAAC 677 >seq98211 Length=569 Score = 156 bits (172), Expect = 6e-33 Identities = 372/545 (68%), Gaps = 32/545 (6%) Strand=Plus/Minus Query 84445 GAAGTGCTGGATCGAACCCTCGGCCGCGACGATTGACTTCCAGACCGCCTCGGTGTTCAG 84504 || |||||| | ||| || || | ||| ||| || ||||||| || ||| ||||| Sbjct 556 GAGGTGCTGCACCGACCCGCCGTGCTCGAGGATCGAATTCCAGATCGTGTCGCTGTTCTT 497 Query 84505 GCCCAGTTCACCCAGGCGCTTCTTCAGCCAGCGGTTCTTGACGGCGAACGAGCCCGACAG 84564 || | || | ||| |||| | ||| | |||||||||| ||||| ||||||||| Sbjct 496 GCTCTTCTCGCTCAGCAGCTT-TCCAGATACGGGTTCTTGACCGCGAAGCTGCCCGACAG 438 Query 84565 GGTCTTGTGCAGGAAGGTGTTGGCCGGGATCGGCTCGATCGACGGCG-AGGTGCCTCCGC 84623 |||||||| | || | |||||||||||||||||||| | |||| |||||| |||| Sbjct 437 CGTCTTGTGGGTGTAGATATTGGCCGGGATCGGCTCGAT-GCAGGCGCTGGTGCCGCCGC 379 Query 84624 AGAGGATCGAGGACGAGGCGTTGGGCGCCACGGCCAGCTTG-TGGGCGAACCGCTCGCCC 84682 ||| ||||||| ||| ||| | ||||| | |||| |||| | ||||||||| || Sbjct 378 AGATGATCGAGATCGACGCGGTCGGCGCGATCGCCATCTTGCAGCTCGAACCGCT--CCA 321 Query 84683 GTGCCTTCCA-TGTC--CGGCGCCTCG--------CCGCGCTCCTTGCCCAGCAGCAGGG 84731 || | ||| |||| ||||| ||| |||||||| || | || ||| | Sbjct 320 GTCACGCCCAGTGTCGGCGGCG-ATCGGGGCAGGCCCGCGCTCGGTGGCGAGGTGCATCG 262 Query 84732 AAGCCGCGTCGGCCTG---CTTGCGCATGTGGGCGAAC-AGTTC-CAGGTTCAGCCGGCG 84786 | ||| |||| |||| |||| | ||| |||| ||| | ||||||| | Sbjct 261 ACGCCTCGTCCACCTGCGCCTTG---ACGTGCTTGAACGAGTGCGCAGGTTCCACGACTT 205 Query 84787 GGCGGCGTG-ACTCTCGAACGGGATGTCCAGCATCTGGAGCAGCGAGTG-GAAGCCGAGC 84844 ||| | | | |||||| || | | || |||||| | ||| | ||| | Sbjct 204 GGCCACTCGCGCCCTCGAAGGGCAGACCGCGCGCCTGGAGGAAGCTGTGCCAGGCCCATG 145 Query 84845 AGGCCCAGGCCCACCGACCGTTCGCGCACGGCGCTGTAGGCGGCGCGGTGCATCTC--GT 84902 | |||||||||||||||||| |||||| ||||| ||||||||||| | |||| | | Sbjct 144 ACGCCCAGGCCCACCGACCGCTCGCGCGCGGCGGAATAGGCGGCGCGCTCCATCCCCGGC 85 Query 84903 CCGGCGCGTTGTCGATGAACACCTGGAGGCAGTTGTCCAGCATGCGCAGCAGGTCTTCGA 84962 ||||||| ||||| | ||||||| ||||| || | |||| || ||| |||| Sbjct 84 TCGGCGCG--ATCGATATAGTCCTGGAGCACATTGTCGAGGAACCGCATCACGTCCTCGA 27 Query 84963 TGAAG 84967 ||||| Sbjct 26 TGAAG 22 >seq35885 Length=611 Score = 132 bits (146), Expect = 7e-26 Identities = 163/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 83591 CATCGCCTCGTAGTCGAGGAAGGCGCGGAACTCGACCTCGGGCAGGCCCAGGGTGTCGAT 83650 |||| ||| ||| | ||||| || || |||| ||||| |||| ||| | |||||||| Sbjct 606 CATCTCCTGGTACTTCAGGAACGCCTGGTACTCCACCTCCGGCATGCCGATGGTGTCGAG 547 Query 83651 CAGCGTCGAGTAGGCGTCGATGTGGTTGGCCTCGGCGGCGATGAACGCGCCCAGCATCAT 83710 ||| ||| ||||| |||||||| ||| |||| | | |||||| ||||||||| Sbjct 546 CAGATGCGAATAGGCCGCGATGTGGATGGTCTCGATGTTGGAGAACGCCGACAGCATCAT 487 Query 83711 CCGCACTTCCGGGTGCGGGAAGCGCGGGCCGTACTTCTCGAAGTAGCCGCGCGCCACGTC 83770 | ||||||| | | || || | ||| ||| | || | |||| ||| ||| || Sbjct 486 CAGCACTTCGGTGGGCTTAAACACCTGGCTGTAGTGCTTCATGTAGGCGCTGTTCACCTC 427 Query 83771 GACGTCGGCCTGGGTGAAGAACCGGAAGAGTTGCGTCAGCAGG 83813 |||||| ||||| |||||||| ||||||| |||||||||||| Sbjct 426 GACGTCCGCCTGCGTGAAGAAGCGGAAGATCTGCGTCAGCAGG 384 >seq75989 Length=485 Score = 105 bits (116), Expect = 9e-18 Identities = 109/139 (78%), Gaps = 3/139 (2%) Strand=Plus/Plus Query 137533 CCGTGCGGGACGGCGTGCTCGATCAGCG-AGCGAAGCTTGGACAGGCTGTCGGGAAGGTC 137591 |||||||| ||||| | |||||| ||| |||| || | |||| |||| || ||||| Sbjct 40 CCGTGCGGCACGGCTTTCTCGATG-GCGCAGCGCAGGCCGTGCAGGTTGTCCGGCAGGTC 98 Query 137592 CGACGCGGTCAGGCTGGTGCGGACCGCCATCATGCCGCAGCCGATGTCGACGCCGACGGC 137651 | ||||||| ||||||| | || ||||| |||||||||||||| ||||| ||||| Sbjct 99 GGCGCCGGTCAGCGTGGTGCGCGCGGCGATCATCCCGCAGCCGATGTCCACGCC-ACGGC 157 Query 137652 GGCCGGGATGATCGCGCCC 137670 || ||||||||||||||| Sbjct 158 AGCAGGGATGATCGCGCCC 176 >seq96425 Length=706 Score = 102 bits (112), Expect = 1e-16 Identities = 171/240 (71%), Gaps = 8/240 (3%) Strand=Plus/Plus Query 145533 ATCTGCTCGACGTTGAACACCAGATAGGACTTCAGGAACGGGATCATCCGCTCGACGTCC 145592 |||||||||||||| || ||| ||||| |||||||||||||||| ||| ||||| || Sbjct 1 ATCTGCTCGACGTTAAATACCGAATAGGCCTTCAGGAACGGGATCTCCCGATCGACCTCG 60 Query 145593 TTGCCGTTGGCGTCCTTCTCGGTCTTCTTGAACTTCG--AGGCGTAGACGATCAGTTCGG 145650 |||||||| ||||| |||| ||| |||| ||| |||| |||||| | || | Sbjct 61 TTGCCGTTCCCGTCCGCTTCGGACTTGGTGAA--TCGGCTGGCGAAGACGA-CGGTCGAG 117 Query 145651 AC-TTCTCGCCCTTGCGGACCTGACCACCCAGGTCCCTGGCTTGGTTGTAGGTCATCCAG 145709 | | ||||||||||| || || || | || || ||| ||| | |||||||| Sbjct 118 CCGGTTTCGCCCTTGCGCACGGCCCCGCCGATTTCGAGGGATTGCTTGAACGTCATCCAC 177 Query 145710 GTCGGGTTGGTGTAGCCGCGC-TCCTGGGCGGCGGCCCACAGGAGGACCACGTTGATCCC 145768 ||| | || | |||||||| | | || | | ||| ||||||| |||||| || || Sbjct 178 ATCGAGGAGGCGAAGCCGCGCGACATCTGC-TCCGACCATAGGAGGAGCACGTTAATGCC 236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 689019927960000