Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq55576 279 9e-70 seq33294 154 3e-32 seq37656 136 7e-27 seq75989 109 1e-18 seq61290 105 1e-17 seq5851 104 4e-17 seq97967 98.7 2e-15 seq14835 93.3 8e-14 seq44855 89.7 9e-13 seq68693 86.0 1e-11 seq47386 86.0 1e-11 seq19094 86.0 1e-11 seq2328 84.2 4e-11 >seq55576 Length=704 Score = 279 bits (308), Expect = 9e-70 Identities = 448/632 (71%), Gaps = 20/632 (3%) Strand=Plus/Minus Query 168326 CTGGGCCGCCATGACGAGTTCGATCGGCTTGTAAGCCTTCGGCG-TCTCGTCGATCACGC 168384 |||||| |||| || | ||||| |||||| ||| |||| | |||||||||||| Sbjct 666 CTGGGCGTCCATTACCTGATCGATGTCCTTGTAGGCCATCGGTTATTTCGTCGATCACGT 607 Query 168385 CTTCGTCCTTGCGGCACTCGACGCCCTTC-GTGGCTTCGACGTGCTCGTCC-AGGGAGAC 168442 | ||||||||||||| || || | | ||||| || || || | | | || || Sbjct 606 CGGCGTCCTTGCGGCATTCCACACTGAGCCGTGGCGCGGATCTGATCCTTCGATGGTGAA 547 Query 168443 GAGCTTCTTCGCCGCCGAACGCGACATGACGCGGCCGGCGCCGTGGCTGCACGAGCAGAA 168502 || |||||||||| | || |||| ||| ||||||||||||||||| |||||||| Sbjct 546 GACCTTCTTCGCCTTGGTTCGGCTCATGGTGCGCCCGGCGCCGTGGCTGCAGGAGCAGAA 487 Query 168503 GGCGTCAGCGTGGCCCTTGCCGCGCACGATGAACGACTTGGCGCCCATCGAACCCGGAAT 168562 || || ||| ||| ||||||||||||| | |||||||||||| || || || || Sbjct 486 CGCCTCCTCGTTACCCAGGCCGCGCACGATGTAGCTCTTGGCGCCCATGGAGCCGGGGAT 427 Query 168563 GATGCCGAGTTCGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGATGTCCTC 168622 |||||| |||||| |||||| ||| ||||||||||| || ||||| || | | || || Sbjct 426 GATGCCCAGTTCGCCCTTCTTCGCTGACACCGCGCCTTTACGGGTTACCAGCACCTCTTC 367 Query 168623 GCCGAAGTGGCGTTCCTTGTTGACGTAGTTGTGGTGACAGTTCACCGCTTCCTTGTCGGT 168682 |||||||| |||||||| | |||||||||||||| |||||||| || ||| | | Sbjct 366 ACCGAAGTGACGTTCCTTCTGCACGTAGTTGTGGTGGCAGTTCACTGCCTCCAGGGCCAC 307 Query 168683 CTTGAACGCCGGCACGA--ACTCC-CGGATCGCCTTGAGCACGCGGA-CCATCATCATGT 168738 || ||||| |||| || || || |||| || ||| || | |||||||| Sbjct 306 CTCGAACGGTTTGACGATCACGCCGCGTGCCGCCGCGATCAC-CGCATGCATCATCAGCG 248 Query 168739 CGCGGTTCAGGCGCGCGAAGTCTTGCGCCCAGCCCACGGCTTCGATGTAGTCGTCGAAAT 168798 |||||||| | |||||||| |||||||||||||| ||||| | ||||| ||||| | Sbjct 247 CGCGGTTCTGCTTGGCGAAGTCCTGCGCCCAGCCCACAGCTTCCACATAGTCATCGAAGT 188 Query 168799 CCTGCTCGCCCACTTCGAGCCACGCGAGGTTCTCG-TCCTGCGGGCGCACATGGCGCTTT 168857 ||| ||| | |||| | || ||| || || ||| || || ||||| | | Sbjct 187 GCTGGCTGCCTTCCTCGAAGTAGGCCAGG-TCACGATCCGGCAGG-----TTGGCGATGT 134 Query 168858 GC-----CAGGGCGTTCTTCGCCTTCTCGATGAAGTAGTTGCCGATCACGTTGCCGACGC 168912 || || || || ||| |||||||| ||||||||| |||| || || | Sbjct 133 GCTGGCGCATATCGGCCTGGGCCAGTTCGATGAACAGGTTGCCGATGGCGTTACCCACAC 74 Query 168913 CGCGCGATCCCGAGTGCAGCATCACCCACACG 168944 ||||||| || ||||||||| | ||| ||| Sbjct 73 CGCGCGAACCGCTGTGCAGCATGAACCAGACG 42 >seq33294 Length=727 Score = 154 bits (170), Expect = 3e-32 Identities = 383/564 (68%), Gaps = 28/564 (5%) Strand=Plus/Minus Query 113554 GGGTTCTTCACGGGGAAGGAGCCCGACAGCGTCTTATGCAGATAGGCGTTGGCGCGCCAC 113613 |||||||| || | |||| ||||||||||||||| || ||| ||||| | | Sbjct 609 GGGTTCTTGACCGCGAAGCTGCCCGACAGCGTCTTGTGGGTGTAGATATTGGCCGGGATC 550 Query 113614 GGCTCGATCGACGGCGA-GGTATTGCCGCAGAGGATAGACGACGACGCGTTGGGAGCGAT 113672 |||||||| | |||| ||| |||||||| ||| || ||||||| | || ||||| Sbjct 549 GGCTCGATGCA-GGCGCTGGTGCCGCCGCAGATGATCGAGATCGACGCGGTCGGCGCGAT 491 Query 113673 CGCCATCTTGTGGGCGAAGCGCTCGCCCGTGCCGATCATGTC--CGGCGCCTCG------ 113724 |||||||||| | | |||||||| | || || | ||| ||||| | | Sbjct 490 CGCCATCTTGCAG-CTAAGCGCTC---CATGACGCCGACGTCGGCGGCGTCCGGGCACGG 435 Query 113725 -CCGCGTTCGGCGCCCAGCTTCAGAGAAGCGGCATCCGCCAGGGTGCGGATGTGCTTGAA 113783 ||||| || ||| | ||| ||| || || | | || | | | |||||||||||| Sbjct 434 CCCGCGCTCCGCGGCGAGCGTCATCGACGCCTGGTTCACCTGCGCGTTGATGTGCTTGAA 375 Query 113784 GAT-CGCACGGTTCACGTTGCGAGCCTTATGCGAC-TCGAACCGGATCATATGCTTCTGA 113841 || |||| ||||| | | ||| | ||| | |||||| | | | || ||| Sbjct 374 CATGCGCA-GGTTCCAGCTCTTGGCCATC-GCGCCCTCGAACGGCAGCCCGCGCG-CTGC 318 Query 113842 AGATAGGCGTGGAAGCCCAGCAGGCCCAGGCCGACCGAACGCTCCTGCGTAGCCGAGTAG 113901 || | | ||||||||||| || |||||| || ||||| ||||| ||| || ||| Sbjct 317 AGGAACGAGTGGAAGCCCATCACGCCCAGACCCACCGAGCGCTCGCGCGCCGCGCTATAG 258 Query 113902 ATCGCGTAGGCCAACGCCGG---CGGAGCGTTGTCGATGAACACCTGGAGGCAGTTGTCC 113958 |||| ||| ||||| || ||| ||||||| | |||| ||| |||||| Sbjct 257 GCCGCGCGCTCCAT-GCCGGGTTCGTGGCG--GTCGATGTAATCCTGCAGGACGTTGTCG 201 Query 113959 AGCATACGCATCAGGTCTTCGATGAAGTGTGGGTCATCGACCCACTCGTCGAACTTCTCG 114018 || | ||||||| ||| |||| |||| || || ||||| ||| || ||||| Sbjct 200 AGGAAGCGCATCACGTCCTCGACGAAGCCCTTCTCGTCCTTCCACTGGTCCCACGTCTCG 141 Query 114019 GCGTTGACGCTCGACAGGCAGCAGACCGCCGTACGCTTCTTGCCTTGATCATCGCGC-CC 114077 ||||| |||||||||||||||||| || || | ||||| ||| ||||| || Sbjct 140 AGGTTGAGCGACGACAGGCAGCAGACCGCGGTGCGGTCGTTGCCGAGATGGTCGCGTGCC 81 Query 114078 GGTCGCCAGCGTGATCTCGGTGCA 114101 |||||| |||||||||||| |||| Sbjct 80 GGTCGC-AGCGTGATCTCGCTGCA 58 >seq37656 Length=523 Score = 136 bits (150), Expect = 7e-27 Identities = 255/369 (69%), Gaps = 22/369 (6%) Strand=Plus/Plus Query 168647 GTAGTTGTGGTGACAGTTCACCGCTTCCTTGTCGGTCTTGAACGCCGGCACGAACTCC-- 168704 |||||||||||| ||||||||||| || | | || |||||| | ||| | || Sbjct 1 GTAGTTGTGGTGGCAGTTCACCGCCTCGGCCTGCGCCTCGAACGCTTGG-CGATCACCGT 59 Query 168705 -CGGATCGCCTTGAGCACGCGGACCATCATCATGTCGCGGTTCAGGCGCGCGAAGTCTTG 168763 |||| ||||| || ||||| | |||||| || |||||||| | ||||| || || Sbjct 60 GCGGACCGCCTCGACCACGCTGCGCATCATGATCTCGCGGTTGATCCGCGCATAGCGCTG 119 Query 168764 CGCCCAGCCCACGGCTTCGATGTAGTCGTCGAAATCCTGCTCGCCCACTTCGAGCCACGC 168823 ||||||| |||| || | ||||||| || | | ||| ||| | || | || Sbjct 120 CGCCCAGTCCACCGCGAACACGTAGTCGCCGTAGTGCTGGCTGCCTTCCGGCAGATAGGC 179 Query 168824 GAGGTTCTCGTCCTGCGGGCGCA-CATGGCGCTTTGCCAGGGCGTTCTTCGCCTTCTCGA 168882 |||| || |||| || || | ||| || || | | | ||| || || || Sbjct 180 CAGGTCCTGGTCCGGCAGGTTGATCATCCAGCGCCGC-ATTTCCTCCTTGGCAAGCTGGA 238 Query 168883 TGAAGTAGTTGCCGATCACGTTGCCGACGCCGCGCGATCCCGAGTGCAGCATCACCCACA 168942 |||||| |||||||||| | ||||||||||||||||| |||||||||||||||||||||| Sbjct 239 TGAAGTGGTTGCCGATCGCATTGCCGACGCCGCGCGA-CCCGAGTGCAGCATCACCCACA 297 Query 168943 CGTTCGGGTCCGTCGTCCCCTGATCGGTCTGGATGCAGATTTCGATGAAGTGGTTGCCGC 169002 | ||| | ||| ||| | || ||| | ||||||||||||||||| | Sbjct 298 C--------CCG----CGCCTCTTCG---TCGAGGCACAGCTCGATGAAGTGGTTGCCAC 342 Query 169003 CACCCAGCG 169011 | |||| || Sbjct 343 CGCCCAACG 351 >seq75989 Length=485 Score = 109 bits (120), Expect = 1e-18 Identities = 161/224 (72%), Gaps = 3/224 (1%) Strand=Plus/Plus Query 169173 CCGTGCGGAACCGCACGTTCGATCGCCGAACGCATCGCCGC-CAAGTTGTCCGGCAGTTG 169231 |||||||| || || ||||| || | |||| |||| || |||||||||||| | Sbjct 40 CCGTGCGGCACGGCTTTCTCGATGGCGCAGCGCAG-GCCGTGCAGGTTGTCCGGCAGGTC 98 Query 169232 CGAAGCAGTCAGCGTGGTGCGCACAGCCATCATGCCGCAGCCGATGTCGACGCCGACCGC 169291 | | ||||||||||||||| | || ||||| |||||||||||||| ||||| || || Sbjct 99 GGCGCCGGTCAGCGTGGTGCGCGCGGCGATCATCCCGCAGCCGATGTCCACGCC-ACGGC 157 Query 169292 GTACGGGATCACCGCATCCTTGGTCGGGATCACCGAACCAACGGCTGCGCCGTACCCGGC 169351 ||||| | ||| || | |||||||| || | || | ||| | || Sbjct 158 AGCAGGGATGATCGCGCCCACCGAGGGGATCACGCTGCCGATGGTCGAGCCCTTGCCCAG 217 Query 169352 GTGGACGTCGGGCATCACCGCGACGTGCTTGAACACGAACGGCA 169395 || ||||||||||||||||| | ||||||||| | |||||||| Sbjct 218 ATGCACGTCGGGCATCACCGCCAGGTGCTTGAAGATGAACGGCA 261 >seq61290 Length=635 Score = 105 bits (116), Expect = 1e-17 Identities = 153/212 (72%), Gaps = 7/212 (3%) Strand=Plus/Plus Query 171094 CGTAGGCGTTGCGGACCAGACCGAAGTTCTGGTTGCGGGCAGCGGCTTCGTGGATCGTCA 171153 |||| |||||||||||| |||||||| ||| ||||||| |||| |||| ||||| | Sbjct 409 CGTACGCGTTGCGGACCTGACCGAAGGACTGCTTGCGGGTGTCGGCGTCGTAGATCGCGA 468 Query 171154 CGGCGACGATGATCTCGTCGA---CGGCCGGGTTCAGCAGGCTGGTGTCGATGGTGATGC 171210 ||| || || || || ||||| |||||||| | | | | || || | ||||| Sbjct 469 CGGTGAAGACGACCTTGTCGATCTCGGCCGGG-ACGGTCG--CGAGGTTGACGTTGATGA 525 Query 171211 GCTCATCATCGCCAGCGCCGTCGCCGGTCAGGTTGTCGCCCGAGTGGACGATCGCGCCGT 171270 ||| || ||||| |||| || ||||| ||||||| || | ||| ||| || || | Sbjct 526 CCTCGTCGTCGCCGTCGCCCTCACCGGTGCGGTTGTCACCGGTGTGCTCGA-CGGACCCT 584 Query 171271 CGGCGGACTTCAGGTTGCCGTAGAACACGAAG 171302 ||| ||||||||| | | | |||| |||||| Sbjct 585 CGGGGGACTTCAGCTGGTTGAAGAAGACGAAG 616 >seq5851 Length=10924 Score = 104 bits (114), Expect = 4e-17 Identities = 77/90 (86%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 132949 GCTCCAAGTTTGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGG 133008 |||||| ||||| |||||||||||||||| |||||||||| ||||||||||| |||| Sbjct 10064 GCTCCAGCTTTGACGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGG 10123 Query 133009 TCGAGGGTTCAAATCCCTCCCCCGCATCCA 133038 ||| ||||||||||| |||||||| ||| Sbjct 10124 TCGTTGGTTCAAATCCAGCCCCCGCAACCA 10153 >seq97967 Length=420 Score = 98.7 bits (108), Expect = 2e-15 Identities = 105/137 (77%), Gaps = 4/137 (3%) Strand=Plus/Plus Query 172329 GACGATCAGGATCGGGAAGATGAAGCGCATGCCGAACACGGCGATGATGATGCCGACGCC 172388 ||||| || |||||||||||| | ||||||||||| ||||||||||||||||||||| Sbjct 129 GACGAGCACGATCGGGAAGATCAGCCGCATGCCGAAGACGGCGATGATGATGCCGACGGA 188 Query 172389 CAGGAAGAGCTTCTTCCACTTCTCGTCCCAATTC--TGAAGAACGTGGGCGTTGACGACG 172446 |||||||| |||| ||| ||| | || | | || | | ||||| |||||| Sbjct 189 CAGGAAGATCTTCCGCCAGAAGTCG--CTCATCCGTTCCAGGATGGTCGCGTTCACGACG 246 Query 172447 GCGTTGTCGAACGACAG 172463 ||||||||||| || || Sbjct 247 GCGTTGTCGAAGGAGAG 263 >seq14835 Length=971 Score = 93.3 bits (102), Expect = 8e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022 |||||||||||||| |||||||||||| ||||||||||| ||||||| ||||||||| Sbjct 729 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTCAAAT 788 Query 133023 CCCTCCCCCGCATCCA 133038 || |||||||| ||| Sbjct 789 CCTGCCCCCGCAACCA 804 >seq44855 Length=668 Score = 89.7 bits (98), Expect = 9e-13 Identities = 71/83 (86%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 61656 CCATCAGTGTGTGGCGCAGTTTGGTAGCGCGCTT-GCTCGGGATGCAAGAGGTCGCAGGT 61714 ||||| | ||||||||||| |||||||||||||| | |||||| | |||||| ||||||| Sbjct 442 CCATCGGGGTGTGGCGCAGCTTGGTAGCGCGCTTCGTTCGGGACG-AAGAGGCCGCAGGT 384 Query 61715 TCAAATCCTGCTACACTGACCAG 61737 |||||||||| || | |||||| Sbjct 383 TCAAATCCTGTCACCCCGACCAG 361 >seq68693 Length=654 Score = 86.0 bits (94), Expect = 1e-11 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 132960 GATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCA 133019 || ||||| |||||||||| |||||||||| ||||||||||| ||||||| |||||| Sbjct 545 GACGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCA 604 Query 133020 AATCCCTCCCCCGCATCCAC 133039 ||||| | |||||| |||| Sbjct 605 AATCCTGCTCCCGCAACCAC 624 >seq47386 Length=810 Score = 86.0 bits (94), Expect = 1e-11 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 191968 CAGCCAGGAACAACTCGCCAGCGCGCTGGGTCTGACCTTCCAGCAGGTGCAGAAGTACGA 192027 ||||||||| | |||| | || || || | ||||| |||||||| ||||| ||||| Sbjct 250 CAGCCAGGAGAAGCTCGGCGAAGCCCTCGGCGTCACCTTTCAGCAGGTCCAGAAATACGA 309 Query 192028 GAAGGGCGGCAATCGCGTCAGCGCGAGCAAGCTGCACGGCATCGGCAAATTCCTGGGCGT 192087 ||||||| ||| |||||| |||||||| || || |||| | | |||| || Sbjct 310 GAAGGGCACCAACCGCGTCGGCGCGAGCCGCCTCCAGAAGATCGCCGAGGTCCTTCAGGT 369 Query 192088 TCCGGTCGCCTTTTTCTTCGAAGGC 192112 ||| || |||| |||||||||||| Sbjct 370 TCCCGTGTCCTTCTTCTTCGAAGGC 394 >seq19094 Length=628 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 132959 TGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTC 133018 || ||||||||||||||||| || ||||||| ||||||||||| ||||||| ||||| Sbjct 227 TGCTGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTC 168 Query 133019 AAATCCCTCCCCCGC 133033 |||||| ||||||| Sbjct 167 AAATCCTGCCCCCGC 153 >seq2328 Length=12646 Score = 84.2 bits (92), Expect = 4e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 132960 GATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCA 133019 || ||||| |||||||||| |||||||||| ||||||||||| ||||||| |||||| Sbjct 8386 GACGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCA 8445 Query 133020 AATCCCTCCCCCGCATCCA 133038 ||||| | |||||| ||| Sbjct 8446 AATCCAGCTCCCGCAACCA 8464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 894307420476000