Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_019485.1 Length=59080 Score E Sequences producing significant alignments: (Bits) Value seq7403 98.7 4e-16 >seq7403 Length=2901 Score = 98.7 bits (108), Expect = 4e-16 Identities = 170/242 (70%), Gaps = 19/242 (8%) Strand=Plus/Plus Query 55476 TAGCTAA-TAGGTGAAGCACCTGACTGTTAATCAGTGATAGAGTGGTTCGATTCCA---- 55530 ||||| | | ||| |||| ||||||||||||| || |||||||| |||| Sbjct 934 TAGCTCAGTCGGTAGAGCAAATGACTGTTAATCATTGGGTCCCTGGTTCGAGTCCAGGTC 993 Query 55531 ------CTACTTACCGCCATT-TCGGGATATAGCTCAGTTTGGTAGAGTGTCTGCTTTGG 55583 | |||| ||||| ||||| |||||| ||| ||||| | | ||||||||| Sbjct 994 GCGGAGCCACTT----CCATTCTCGGGGTATAGCGCAGCCCGGTAGCGCGCCTGCTTTGG 1049 Query 55584 GAGCAGAATGTCGTTGGTTCAAGTCCAGCTATCCCGACCA-ATTAGTGCCTTTAGCTCAG 55642 |||||| |||||| |||| | ||| ||| |||||||| ||| | | | ||||||||| Sbjct 1050 GAGCAGGATGTCGGGAGTTCGAATCC-CCTACCCCGACCATATTTGGGTCGTTAGCTCAG 1108 Query 55643 ACGGTTAGAGCAGCCGACTCATAATCGGTAGGTCACAGGTTCAAATCCTGTAGGGCGCAC 55702 ||| |||||||| | || ||| | | |||| |||||| |||||| | | | ||| Sbjct 1109 TCGG-TAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCAC 1167 Query 55703 CA 55704 || Sbjct 1168 CA 1169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 188642059441200