Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_019489.1 Length=41726 Score E Sequences producing significant alignments: (Bits) Value seq115941 140 9e-29 >seq115941 Length=788 Score = 140 bits (154), Expect = 9e-29 Identities = 430/651 (66%), Gaps = 33/651 (5%) Strand=Plus/Plus Query 10130 AAGCTATCACTTATCAAATACACGATTCATCGGTATGCTGGTATTACCACCGCTACTAAT 10189 || || || |||||||||||||| || | || ||||||||||| | || | |||||| Sbjct 2 AAACTTTCTCTTATCAAATACACTATCAAGCGCTATGCTGGTATCTCAACAGTTACTAAC 61 Query 10190 TCACTGTTAAAGGACACGGCCGACAACATCTTATCTTGGTTATCTGGATGGATTGCTAAG 10249 || | || | || || || ||| | ||||| | |||| |||||||| || Sbjct 62 AGCTTGCTTGCTGATTCTGCTGAAAATATCCTTGCTTGGCTTTCTGATTGGATTGCAAAA 121 Query 10250 AAGGTTGTTGTTACTCGCAACGCTAAGAT-TATTGCA-GCAATGAACGCAGCGCCTA-AG 10306 ||| ||||||| ||||| ||| ||| | | ||| | || || ||| ||| | | Sbjct 122 AAG-TTGTTGTAACTCGTAACA--AAGCTATCTTGGAAGCTAT---CGCTACGCTTCCAA 175 Query 10307 AAACCTAGCTTGGCTAAGTTCGATGACATTATC-ACCATGATTAACACTTCCGTTGATCC 10365 ||||| | ||| | || | |||||||| || ||| || | || ||||| || Sbjct 176 AAACCAACATTGACAAAATGGGATGACATCATTGACC----TTCAAGCTAAAGTTGACCC 231 Query 10366 TGCCATCAAGGCTACGTCATTCTTAATGACAAATACTTCTGGTTTGAATGTACTTTCCGA 10425 || || ||| || |||||||| |||| ||||| ||||| || | || |||| | Sbjct 232 AGCAATTAAGCAAACATCATTCTTCTTGACTAATACGTCTGGATTTACTGCACTTAAGAA 291 Query 10426 GGTTAAGGATGCTATGGGTCGCTACTTATTACAACCAGATCCAACACAACCTGACCAATA 10485 || ||| |||| | ||| || || | ||| || || || ||| || Sbjct 292 AGTAAAGAATGCATTTGGTGATTATCTAATGGAACGTGACGTAAATCA-CCTACAGGCTA 350 Query 10486 TTTAATTCGCGGCAAACGGATTGTG-GAAGTTGCCGACAAGTGGTTGCCTAACGTTGGCA 10544 || ||| ||| | || | | ||||| || ||| ||| | |||| Sbjct 351 TTCAAT-CGCTGGCTTCGCAGTCAAAGAAGTCGCTGACCGTTGGCTTGCTAA-------- 401 Query 10545 CTGCGTCAGCTCCAGCTTACCCACTTTACTATGGTGACTTATCACAAGCGGTAACTTTGT 10604 ||| |||| | ||| ||| | || | |||||| || |||||| || ||||||| Sbjct 402 -TGCATCAGGTGGAGCAATGCCATTGTATTTTGGTGATTTGAAACAAGCCGTTACTTTGT 460 Query 10605 TTGACCGAGAAAATCTTTCATTACTGACTACCAACATTGGTGGTGGTGCCTTTGAAAAGG 10664 ||||||| || | | ||||| || |||||| || ||||||||||| ||||||| | Sbjct 461 TTGACCGTCAACAAATGTCATTGCTATCTACCAT-ATCGGTGGTGGTGCGTTTGAAACTG 519 Query 10665 ATCAAACTAAGATTCGTGTCATTGACCGTTTTGACGTTGAAGCTACTGATACGGATGCCT 10724 | ||||| | ||||| |||||||||||||| |||| ||| |||||||| || || | Sbjct 520 ACACTACTAAAGTACGTGTTATTGACCGTTTTGATGTTGTAGCAACTGATACAGAAGCGT 579 Query 10725 TTGTTGCAGGCTCATTCAGTAAA---ATTGCTGACCAACCAGCCAACTTTG 10772 |||| ||| ||||| |||| || ||||||||| || ||| ||| Sbjct 580 TTGTACCAGCTTCATT---TAAAGCCATCGCTGACCAAAAAGGTAACATTG 627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133195186036800